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Metabolic profiling identifies the significance of caffeine metabolism in CKD
Background: With the development of chronic kidney disease (CKD), there are various changes in metabolites. However, the effect of these metabolites on the etiology, progression and prognosis of CKD remains unclear. Objective: We aimed to identify significant metabolic pathways in CKD progression by...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9981652/ https://www.ncbi.nlm.nih.gov/pubmed/36873366 http://dx.doi.org/10.3389/fbioe.2023.1006246 |
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author | Guo, Xinghua Peng, Hongquan Liu, Peijia Tang, Leile Fang, Jia Aoieong, Chiwa Tou, Tou Tsai, Tsungyang Liu, Xun |
author_facet | Guo, Xinghua Peng, Hongquan Liu, Peijia Tang, Leile Fang, Jia Aoieong, Chiwa Tou, Tou Tsai, Tsungyang Liu, Xun |
author_sort | Guo, Xinghua |
collection | PubMed |
description | Background: With the development of chronic kidney disease (CKD), there are various changes in metabolites. However, the effect of these metabolites on the etiology, progression and prognosis of CKD remains unclear. Objective: We aimed to identify significant metabolic pathways in CKD progression by screening metabolites through metabolic profiling, thus identifying potential targets for CKD treatment. Methods: Clinical data were collected from 145 CKD participants. GFR (mGFR) was measured by the iohexol method and participants were divided into four groups according to their mGFR. Untargeted metabolomics analysis was performed via UPLC-MS/MSUPLC–MSMS/MS assays. Metabolomic data were analyzed by MetaboAnalyst 5.0, one-way ANOVA, principal component analysis (PCA), and partial least squares discriminant analysis (PLS-DA) to identify differential metabolites for further analysis. The open database sources of MBRole2.0, including KEGG and HMDB, were used to identify significant metabolic pathways in CKD progression. Results: Four metabolic pathways were classified as important in CKD progression, among which the most significant was caffeine metabolism. A total of 12 differential metabolites were enriched in caffeine metabolism, four of which decreased with the deterioration of the CKD stage, and two of which increased with the deterioration of the CKD stage. Of the four decreased metabolites, the most important was caffeine. Conclusion: Caffeine metabolism appears to be the most important pathway in the progression of CKD as identified by metabolic profiling. Caffeine is the most important metabolite that decreases with the deterioration of the CKD stage. |
format | Online Article Text |
id | pubmed-9981652 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-99816522023-03-04 Metabolic profiling identifies the significance of caffeine metabolism in CKD Guo, Xinghua Peng, Hongquan Liu, Peijia Tang, Leile Fang, Jia Aoieong, Chiwa Tou, Tou Tsai, Tsungyang Liu, Xun Front Bioeng Biotechnol Bioengineering and Biotechnology Background: With the development of chronic kidney disease (CKD), there are various changes in metabolites. However, the effect of these metabolites on the etiology, progression and prognosis of CKD remains unclear. Objective: We aimed to identify significant metabolic pathways in CKD progression by screening metabolites through metabolic profiling, thus identifying potential targets for CKD treatment. Methods: Clinical data were collected from 145 CKD participants. GFR (mGFR) was measured by the iohexol method and participants were divided into four groups according to their mGFR. Untargeted metabolomics analysis was performed via UPLC-MS/MSUPLC–MSMS/MS assays. Metabolomic data were analyzed by MetaboAnalyst 5.0, one-way ANOVA, principal component analysis (PCA), and partial least squares discriminant analysis (PLS-DA) to identify differential metabolites for further analysis. The open database sources of MBRole2.0, including KEGG and HMDB, were used to identify significant metabolic pathways in CKD progression. Results: Four metabolic pathways were classified as important in CKD progression, among which the most significant was caffeine metabolism. A total of 12 differential metabolites were enriched in caffeine metabolism, four of which decreased with the deterioration of the CKD stage, and two of which increased with the deterioration of the CKD stage. Of the four decreased metabolites, the most important was caffeine. Conclusion: Caffeine metabolism appears to be the most important pathway in the progression of CKD as identified by metabolic profiling. Caffeine is the most important metabolite that decreases with the deterioration of the CKD stage. Frontiers Media S.A. 2023-02-17 /pmc/articles/PMC9981652/ /pubmed/36873366 http://dx.doi.org/10.3389/fbioe.2023.1006246 Text en Copyright © 2023 Guo, Peng, Liu, Tang, Fang, Aoieong, Tou, Tsai and Liu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Bioengineering and Biotechnology Guo, Xinghua Peng, Hongquan Liu, Peijia Tang, Leile Fang, Jia Aoieong, Chiwa Tou, Tou Tsai, Tsungyang Liu, Xun Metabolic profiling identifies the significance of caffeine metabolism in CKD |
title | Metabolic profiling identifies the significance of caffeine metabolism in CKD |
title_full | Metabolic profiling identifies the significance of caffeine metabolism in CKD |
title_fullStr | Metabolic profiling identifies the significance of caffeine metabolism in CKD |
title_full_unstemmed | Metabolic profiling identifies the significance of caffeine metabolism in CKD |
title_short | Metabolic profiling identifies the significance of caffeine metabolism in CKD |
title_sort | metabolic profiling identifies the significance of caffeine metabolism in ckd |
topic | Bioengineering and Biotechnology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9981652/ https://www.ncbi.nlm.nih.gov/pubmed/36873366 http://dx.doi.org/10.3389/fbioe.2023.1006246 |
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