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Relationships of ferroptosis-related genes with the pathogenesis in polycystic ovary syndrome
BACKGROUND: Numerous studies have suggested that ferroptosis plays a significant role in the development of polycystic ovary syndrome (PCOS), but the mechanism remains unclear. METHODS: In this study, we explored the role of ferroptosis-related genes in the pathogenesis of PCOS using a comprehensive...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9981782/ https://www.ncbi.nlm.nih.gov/pubmed/36873892 http://dx.doi.org/10.3389/fmed.2023.1120693 |
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author | Lin, Shuang Jin, Xin Gu, He Bi, Fangfang |
author_facet | Lin, Shuang Jin, Xin Gu, He Bi, Fangfang |
author_sort | Lin, Shuang |
collection | PubMed |
description | BACKGROUND: Numerous studies have suggested that ferroptosis plays a significant role in the development of polycystic ovary syndrome (PCOS), but the mechanism remains unclear. METHODS: In this study, we explored the role of ferroptosis-related genes in the pathogenesis of PCOS using a comprehensive bioinformatics method. First, we downloaded several Gene Expression Omnibus (GEO) datasets and combined them into a meta-GEO dataset. Differential expression analysis was performed to screen for significant ferroptosis-related genes between the normal and PCOS samples. The least absolute shrinkage selection operator regression and support vector machine–recursive feature elimination were used to select the best signs to construct a PCOS diagnostic model. Receiver operating characteristic curve analysis and decision curve analysis were applied to test the performance of the model. Finally, a ceRNA network-related ferroptosis gene was constructed. RESULTS: Five genes, namely, NOX1, ACVR1B, PHF21A, FTL, and GALNT14, were identified from 10 differentially expressed ferroptosis-related genes to construct a PCOS diagnostic model. Finally, a ceRNA network including 117 lncRNAs, 67 miRNAs, and five ferroptosis-related genes was constructed. CONCLUSION: Our study identified five ferroptosis-related genes that may be involved in the pathogenesis of PCOS, which may provide a novel perspective for the clinical diagnosis and treatment of PCOS. |
format | Online Article Text |
id | pubmed-9981782 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-99817822023-03-04 Relationships of ferroptosis-related genes with the pathogenesis in polycystic ovary syndrome Lin, Shuang Jin, Xin Gu, He Bi, Fangfang Front Med (Lausanne) Medicine BACKGROUND: Numerous studies have suggested that ferroptosis plays a significant role in the development of polycystic ovary syndrome (PCOS), but the mechanism remains unclear. METHODS: In this study, we explored the role of ferroptosis-related genes in the pathogenesis of PCOS using a comprehensive bioinformatics method. First, we downloaded several Gene Expression Omnibus (GEO) datasets and combined them into a meta-GEO dataset. Differential expression analysis was performed to screen for significant ferroptosis-related genes between the normal and PCOS samples. The least absolute shrinkage selection operator regression and support vector machine–recursive feature elimination were used to select the best signs to construct a PCOS diagnostic model. Receiver operating characteristic curve analysis and decision curve analysis were applied to test the performance of the model. Finally, a ceRNA network-related ferroptosis gene was constructed. RESULTS: Five genes, namely, NOX1, ACVR1B, PHF21A, FTL, and GALNT14, were identified from 10 differentially expressed ferroptosis-related genes to construct a PCOS diagnostic model. Finally, a ceRNA network including 117 lncRNAs, 67 miRNAs, and five ferroptosis-related genes was constructed. CONCLUSION: Our study identified five ferroptosis-related genes that may be involved in the pathogenesis of PCOS, which may provide a novel perspective for the clinical diagnosis and treatment of PCOS. Frontiers Media S.A. 2023-02-17 /pmc/articles/PMC9981782/ /pubmed/36873892 http://dx.doi.org/10.3389/fmed.2023.1120693 Text en Copyright © 2023 Lin, Jin, Gu and Bi. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Medicine Lin, Shuang Jin, Xin Gu, He Bi, Fangfang Relationships of ferroptosis-related genes with the pathogenesis in polycystic ovary syndrome |
title | Relationships of ferroptosis-related genes with the pathogenesis in polycystic ovary syndrome |
title_full | Relationships of ferroptosis-related genes with the pathogenesis in polycystic ovary syndrome |
title_fullStr | Relationships of ferroptosis-related genes with the pathogenesis in polycystic ovary syndrome |
title_full_unstemmed | Relationships of ferroptosis-related genes with the pathogenesis in polycystic ovary syndrome |
title_short | Relationships of ferroptosis-related genes with the pathogenesis in polycystic ovary syndrome |
title_sort | relationships of ferroptosis-related genes with the pathogenesis in polycystic ovary syndrome |
topic | Medicine |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9981782/ https://www.ncbi.nlm.nih.gov/pubmed/36873892 http://dx.doi.org/10.3389/fmed.2023.1120693 |
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