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GEOfetch: a command-line tool for downloading data and standardized metadata from GEO and SRA
MOTIVATION: The Gene Expression Omnibus has become an important source of biological data for secondary analysis. However, there is no simple, programmatic way to download data and metadata from Gene Expression Omnibus (GEO) in a standardized annotation format. RESULTS: To address this, we present G...
Autores principales: | Khoroshevskyi, Oleksandr, LeRoy, Nathan, Reuter, Vincent P, Sheffield, Nathan C |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9982356/ https://www.ncbi.nlm.nih.gov/pubmed/36857584 http://dx.doi.org/10.1093/bioinformatics/btad069 |
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