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A rapid nucleic acid detection platform based on phosphorothioate-DNA and sulfur binding domain

Nucleic acid detection plays a key role in diverse diagnosis and disease control. Currently available nucleic acid detection techniques are challenged by trade-offs among speed, simplicity, precision and cost. Here, we described a novel method, designated SENSOR (Sulfur DNA mediated nucleic acid sen...

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Autores principales: Shuai, Yuting, Ju, Yi, Li, Yuanhang, Ma, Dini, Jiang, Lan, Zhang, Jingyu, Tan, Gao-Yi, Liu, Xueting, Wang, Shenlin, Zhang, Lixin, Liu, Guang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: KeAi Publishing 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9982451/
https://www.ncbi.nlm.nih.gov/pubmed/36875498
http://dx.doi.org/10.1016/j.synbio.2023.02.002
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author Shuai, Yuting
Ju, Yi
Li, Yuanhang
Ma, Dini
Jiang, Lan
Zhang, Jingyu
Tan, Gao-Yi
Liu, Xueting
Wang, Shenlin
Zhang, Lixin
Liu, Guang
author_facet Shuai, Yuting
Ju, Yi
Li, Yuanhang
Ma, Dini
Jiang, Lan
Zhang, Jingyu
Tan, Gao-Yi
Liu, Xueting
Wang, Shenlin
Zhang, Lixin
Liu, Guang
author_sort Shuai, Yuting
collection PubMed
description Nucleic acid detection plays a key role in diverse diagnosis and disease control. Currently available nucleic acid detection techniques are challenged by trade-offs among speed, simplicity, precision and cost. Here, we described a novel method, designated SENSOR (Sulfur DNA mediated nucleic acid sensing platform), for rapid nucleic acid detection. SENSOR was developed from phosphorothioate (PT)-DNA and sulfur binding domain (SBD) which specifically binds double-stranded PT-modified DNA. SENSOR utilizes PT-DNA oligo and SBD as targeting module, which is linked with split luciferase reporter to generate luminescence signal within 10 min. We tested detection on synthesized nucleic acid and COVID-19 pseudovirus, achieving attomolar sensitivity combined with an amplification procedure. Single nucleotide polymorphisms (SNP) could also be discriminated. Indicating SENSOR a new promising nucleic acid detection technique.
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spelling pubmed-99824512023-03-04 A rapid nucleic acid detection platform based on phosphorothioate-DNA and sulfur binding domain Shuai, Yuting Ju, Yi Li, Yuanhang Ma, Dini Jiang, Lan Zhang, Jingyu Tan, Gao-Yi Liu, Xueting Wang, Shenlin Zhang, Lixin Liu, Guang Synth Syst Biotechnol Original Research Article Nucleic acid detection plays a key role in diverse diagnosis and disease control. Currently available nucleic acid detection techniques are challenged by trade-offs among speed, simplicity, precision and cost. Here, we described a novel method, designated SENSOR (Sulfur DNA mediated nucleic acid sensing platform), for rapid nucleic acid detection. SENSOR was developed from phosphorothioate (PT)-DNA and sulfur binding domain (SBD) which specifically binds double-stranded PT-modified DNA. SENSOR utilizes PT-DNA oligo and SBD as targeting module, which is linked with split luciferase reporter to generate luminescence signal within 10 min. We tested detection on synthesized nucleic acid and COVID-19 pseudovirus, achieving attomolar sensitivity combined with an amplification procedure. Single nucleotide polymorphisms (SNP) could also be discriminated. Indicating SENSOR a new promising nucleic acid detection technique. KeAi Publishing 2023-02-11 /pmc/articles/PMC9982451/ /pubmed/36875498 http://dx.doi.org/10.1016/j.synbio.2023.02.002 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Original Research Article
Shuai, Yuting
Ju, Yi
Li, Yuanhang
Ma, Dini
Jiang, Lan
Zhang, Jingyu
Tan, Gao-Yi
Liu, Xueting
Wang, Shenlin
Zhang, Lixin
Liu, Guang
A rapid nucleic acid detection platform based on phosphorothioate-DNA and sulfur binding domain
title A rapid nucleic acid detection platform based on phosphorothioate-DNA and sulfur binding domain
title_full A rapid nucleic acid detection platform based on phosphorothioate-DNA and sulfur binding domain
title_fullStr A rapid nucleic acid detection platform based on phosphorothioate-DNA and sulfur binding domain
title_full_unstemmed A rapid nucleic acid detection platform based on phosphorothioate-DNA and sulfur binding domain
title_short A rapid nucleic acid detection platform based on phosphorothioate-DNA and sulfur binding domain
title_sort rapid nucleic acid detection platform based on phosphorothioate-dna and sulfur binding domain
topic Original Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9982451/
https://www.ncbi.nlm.nih.gov/pubmed/36875498
http://dx.doi.org/10.1016/j.synbio.2023.02.002
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