A Chromosome-length Assembly of the Black Petaltail (Tanypteryx hageni) Dragonfly

We present a chromosome-length genome assembly and annotation of the Black Petaltail dragonfly (Tanypteryx hageni). This habitat specialist diverged from its sister species over 70 million years ago, and separated from the most closely related Odonata with a reference genome 150 million years ago. U...

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Autores principales: Tolman, Ethan R, Beatty, Christopher D, Bush, Jonas, Kohli, Manpreet, Moreno, Carlos M, Ware, Jessica L, Weber, K Scott, Khan, Ruqayya, Maheshwari, Chirag, Weisz, David, Dudchenko, Olga, Aiden, Erez Lieberman, Frandsen, Paul B
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Genome Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9985156/
https://www.ncbi.nlm.nih.gov/pubmed/36807678
http://dx.doi.org/10.1093/gbe/evad024
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author Tolman, Ethan R
Beatty, Christopher D
Bush, Jonas
Kohli, Manpreet
Moreno, Carlos M
Ware, Jessica L
Weber, K Scott
Khan, Ruqayya
Maheshwari, Chirag
Weisz, David
Dudchenko, Olga
Aiden, Erez Lieberman
Frandsen, Paul B
author_facet Tolman, Ethan R
Beatty, Christopher D
Bush, Jonas
Kohli, Manpreet
Moreno, Carlos M
Ware, Jessica L
Weber, K Scott
Khan, Ruqayya
Maheshwari, Chirag
Weisz, David
Dudchenko, Olga
Aiden, Erez Lieberman
Frandsen, Paul B
author_sort Tolman, Ethan R
collection PubMed
description We present a chromosome-length genome assembly and annotation of the Black Petaltail dragonfly (Tanypteryx hageni). This habitat specialist diverged from its sister species over 70 million years ago, and separated from the most closely related Odonata with a reference genome 150 million years ago. Using PacBio HiFi reads and Hi-C data for scaffolding we produce one of the most high-quality Odonata genomes to date. A scaffold N50 of 206.6 Mb and a single copy BUSCO score of 96.2% indicate high contiguity and completeness.
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spelling pubmed-99851562023-03-05 A Chromosome-length Assembly of the Black Petaltail (Tanypteryx hageni) Dragonfly Tolman, Ethan R Beatty, Christopher D Bush, Jonas Kohli, Manpreet Moreno, Carlos M Ware, Jessica L Weber, K Scott Khan, Ruqayya Maheshwari, Chirag Weisz, David Dudchenko, Olga Aiden, Erez Lieberman Frandsen, Paul B Genome Biol Evol Genome Report We present a chromosome-length genome assembly and annotation of the Black Petaltail dragonfly (Tanypteryx hageni). This habitat specialist diverged from its sister species over 70 million years ago, and separated from the most closely related Odonata with a reference genome 150 million years ago. Using PacBio HiFi reads and Hi-C data for scaffolding we produce one of the most high-quality Odonata genomes to date. A scaffold N50 of 206.6 Mb and a single copy BUSCO score of 96.2% indicate high contiguity and completeness. Oxford University Press 2023-02-18 /pmc/articles/PMC9985156/ /pubmed/36807678 http://dx.doi.org/10.1093/gbe/evad024 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of Society for Molecular Biology and Evolution. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Genome Report
Tolman, Ethan R
Beatty, Christopher D
Bush, Jonas
Kohli, Manpreet
Moreno, Carlos M
Ware, Jessica L
Weber, K Scott
Khan, Ruqayya
Maheshwari, Chirag
Weisz, David
Dudchenko, Olga
Aiden, Erez Lieberman
Frandsen, Paul B
A Chromosome-length Assembly of the Black Petaltail (Tanypteryx hageni) Dragonfly
title A Chromosome-length Assembly of the Black Petaltail (Tanypteryx hageni) Dragonfly
title_full A Chromosome-length Assembly of the Black Petaltail (Tanypteryx hageni) Dragonfly
title_fullStr A Chromosome-length Assembly of the Black Petaltail (Tanypteryx hageni) Dragonfly
title_full_unstemmed A Chromosome-length Assembly of the Black Petaltail (Tanypteryx hageni) Dragonfly
title_short A Chromosome-length Assembly of the Black Petaltail (Tanypteryx hageni) Dragonfly
title_sort chromosome-length assembly of the black petaltail (tanypteryx hageni) dragonfly
topic Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9985156/
https://www.ncbi.nlm.nih.gov/pubmed/36807678
http://dx.doi.org/10.1093/gbe/evad024
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