Cargando…
The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies
BACKGROUND: Over the last decades, enormous successes have been achieved in reducing malaria burden globally. In Latin America, South East Asia, and the Western Pacific, many countries now pursue the goal of malaria elimination by 2030. It is widely acknowledged that Plasmodium spp. infections clust...
Autores principales: | , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9985228/ https://www.ncbi.nlm.nih.gov/pubmed/36870976 http://dx.doi.org/10.1186/s12936-023-04515-4 |
_version_ | 1784900908662915072 |
---|---|
author | Sandfort, Mirco Monteiro, Wuelton Lacerda, Marcus Nguitragool, Wang Sattabongkot, Jetsumon Waltmann, Andreea Salje, Henrik Vantaux, Amélie Witkowski, Benoit Robinson, Leanne J. Mueller, Ivo White, Michael |
author_facet | Sandfort, Mirco Monteiro, Wuelton Lacerda, Marcus Nguitragool, Wang Sattabongkot, Jetsumon Waltmann, Andreea Salje, Henrik Vantaux, Amélie Witkowski, Benoit Robinson, Leanne J. Mueller, Ivo White, Michael |
author_sort | Sandfort, Mirco |
collection | PubMed |
description | BACKGROUND: Over the last decades, enormous successes have been achieved in reducing malaria burden globally. In Latin America, South East Asia, and the Western Pacific, many countries now pursue the goal of malaria elimination by 2030. It is widely acknowledged that Plasmodium spp. infections cluster spatially so that interventions need to be spatially informed, e.g. spatially targeted reactive case detection strategies. Here, the spatial signature method is introduced as a tool to quantify the distance around an index infection within which other infections significantly cluster. METHODS: Data were considered from cross-sectional surveys from Brazil, Thailand, Cambodia, and Solomon Islands, conducted between 2012 and 2018. Household locations were recorded by GPS and finger-prick blood samples from participants were tested for Plasmodium infection by PCR. Cohort studies from Brazil and Thailand with monthly sampling over a year from 2013 until 2014 were also included. The prevalence of PCR-confirmed infections was calculated at increasing distance around index infections (and growing time intervals in the cohort studies). Statistical significance was defined as prevalence outside of a 95%-quantile interval of a bootstrap null distribution after random re-allocation of locations of infections. RESULTS: Prevalence of Plasmodium vivax and Plasmodium falciparum infections was elevated in close proximity around index infections and decreased with distance in most study sites, e.g. from 21.3% at 0 km to the global study prevalence of 6.4% for P. vivax in the Cambodian survey. In the cohort studies, the clustering decreased with longer time windows. The distance from index infections to a 50% reduction of prevalence ranged from 25 m to 3175 m, tending to shorter distances at lower global study prevalence. CONCLUSIONS: The spatial signatures of P. vivax and P. falciparum infections demonstrate spatial clustering across a diverse set of study sites, quantifying the distance within which the clustering occurs. The method offers a novel tool in malaria epidemiology, potentially informing reactive intervention strategies regarding radius choices of operations around detected infections and thus strengthening malaria elimination endeavours. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12936-023-04515-4. |
format | Online Article Text |
id | pubmed-9985228 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-99852282023-03-05 The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies Sandfort, Mirco Monteiro, Wuelton Lacerda, Marcus Nguitragool, Wang Sattabongkot, Jetsumon Waltmann, Andreea Salje, Henrik Vantaux, Amélie Witkowski, Benoit Robinson, Leanne J. Mueller, Ivo White, Michael Malar J Research BACKGROUND: Over the last decades, enormous successes have been achieved in reducing malaria burden globally. In Latin America, South East Asia, and the Western Pacific, many countries now pursue the goal of malaria elimination by 2030. It is widely acknowledged that Plasmodium spp. infections cluster spatially so that interventions need to be spatially informed, e.g. spatially targeted reactive case detection strategies. Here, the spatial signature method is introduced as a tool to quantify the distance around an index infection within which other infections significantly cluster. METHODS: Data were considered from cross-sectional surveys from Brazil, Thailand, Cambodia, and Solomon Islands, conducted between 2012 and 2018. Household locations were recorded by GPS and finger-prick blood samples from participants were tested for Plasmodium infection by PCR. Cohort studies from Brazil and Thailand with monthly sampling over a year from 2013 until 2014 were also included. The prevalence of PCR-confirmed infections was calculated at increasing distance around index infections (and growing time intervals in the cohort studies). Statistical significance was defined as prevalence outside of a 95%-quantile interval of a bootstrap null distribution after random re-allocation of locations of infections. RESULTS: Prevalence of Plasmodium vivax and Plasmodium falciparum infections was elevated in close proximity around index infections and decreased with distance in most study sites, e.g. from 21.3% at 0 km to the global study prevalence of 6.4% for P. vivax in the Cambodian survey. In the cohort studies, the clustering decreased with longer time windows. The distance from index infections to a 50% reduction of prevalence ranged from 25 m to 3175 m, tending to shorter distances at lower global study prevalence. CONCLUSIONS: The spatial signatures of P. vivax and P. falciparum infections demonstrate spatial clustering across a diverse set of study sites, quantifying the distance within which the clustering occurs. The method offers a novel tool in malaria epidemiology, potentially informing reactive intervention strategies regarding radius choices of operations around detected infections and thus strengthening malaria elimination endeavours. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12936-023-04515-4. BioMed Central 2023-03-04 /pmc/articles/PMC9985228/ /pubmed/36870976 http://dx.doi.org/10.1186/s12936-023-04515-4 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Sandfort, Mirco Monteiro, Wuelton Lacerda, Marcus Nguitragool, Wang Sattabongkot, Jetsumon Waltmann, Andreea Salje, Henrik Vantaux, Amélie Witkowski, Benoit Robinson, Leanne J. Mueller, Ivo White, Michael The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies |
title | The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies |
title_full | The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies |
title_fullStr | The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies |
title_full_unstemmed | The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies |
title_short | The spatial signature of Plasmodium vivax and Plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies |
title_sort | spatial signature of plasmodium vivax and plasmodium falciparum infections: quantifying the clustering of infections in cross-sectional surveys and cohort studies |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9985228/ https://www.ncbi.nlm.nih.gov/pubmed/36870976 http://dx.doi.org/10.1186/s12936-023-04515-4 |
work_keys_str_mv | AT sandfortmirco thespatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT monteirowuelton thespatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT lacerdamarcus thespatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT nguitragoolwang thespatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT sattabongkotjetsumon thespatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT waltmannandreea thespatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT saljehenrik thespatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT vantauxamelie thespatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT witkowskibenoit thespatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT robinsonleannej thespatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT muellerivo thespatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT whitemichael thespatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT sandfortmirco spatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT monteirowuelton spatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT lacerdamarcus spatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT nguitragoolwang spatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT sattabongkotjetsumon spatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT waltmannandreea spatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT saljehenrik spatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT vantauxamelie spatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT witkowskibenoit spatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT robinsonleannej spatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT muellerivo spatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies AT whitemichael spatialsignatureofplasmodiumvivaxandplasmodiumfalciparuminfectionsquantifyingtheclusteringofinfectionsincrosssectionalsurveysandcohortstudies |