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A single strand: A simplified approach to DNA origami

Just as a single polypeptide strand can self-fold into a complex 3D structure, a single strand of DNA can self-fold into DNA origami. Most DNA origami structures (i.e., the scaffold-staple and DNA tiling systems) utilize hundreds of short single-stranded DNA. As such, these structures come with chal...

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Autores principales: Yang, Micah, Bakker, David, Raghu, Dyuti, Li, Isaac T. S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9986268/
https://www.ncbi.nlm.nih.gov/pubmed/36891219
http://dx.doi.org/10.3389/fchem.2023.1126177
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author Yang, Micah
Bakker, David
Raghu, Dyuti
Li, Isaac T. S.
author_facet Yang, Micah
Bakker, David
Raghu, Dyuti
Li, Isaac T. S.
author_sort Yang, Micah
collection PubMed
description Just as a single polypeptide strand can self-fold into a complex 3D structure, a single strand of DNA can self-fold into DNA origami. Most DNA origami structures (i.e., the scaffold-staple and DNA tiling systems) utilize hundreds of short single-stranded DNA. As such, these structures come with challenges inherent to intermolecular construction. Many assembly challenges involving intermolecular interactions can be resolved if the origami structure is constructed from one DNA strand, where folding is not concentration dependent, the folded structure is more resistant to nuclease degradation, and the synthesis can be achieved at an industrial scale at a thousandth of the cost. This review discusses the design principles and considerations employed in single-stranded DNA origami and its potential benefits and drawbacks.
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spelling pubmed-99862682023-03-07 A single strand: A simplified approach to DNA origami Yang, Micah Bakker, David Raghu, Dyuti Li, Isaac T. S. Front Chem Chemistry Just as a single polypeptide strand can self-fold into a complex 3D structure, a single strand of DNA can self-fold into DNA origami. Most DNA origami structures (i.e., the scaffold-staple and DNA tiling systems) utilize hundreds of short single-stranded DNA. As such, these structures come with challenges inherent to intermolecular construction. Many assembly challenges involving intermolecular interactions can be resolved if the origami structure is constructed from one DNA strand, where folding is not concentration dependent, the folded structure is more resistant to nuclease degradation, and the synthesis can be achieved at an industrial scale at a thousandth of the cost. This review discusses the design principles and considerations employed in single-stranded DNA origami and its potential benefits and drawbacks. Frontiers Media S.A. 2023-02-20 /pmc/articles/PMC9986268/ /pubmed/36891219 http://dx.doi.org/10.3389/fchem.2023.1126177 Text en Copyright © 2023 Yang, Bakker, Raghu and Li. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Chemistry
Yang, Micah
Bakker, David
Raghu, Dyuti
Li, Isaac T. S.
A single strand: A simplified approach to DNA origami
title A single strand: A simplified approach to DNA origami
title_full A single strand: A simplified approach to DNA origami
title_fullStr A single strand: A simplified approach to DNA origami
title_full_unstemmed A single strand: A simplified approach to DNA origami
title_short A single strand: A simplified approach to DNA origami
title_sort single strand: a simplified approach to dna origami
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9986268/
https://www.ncbi.nlm.nih.gov/pubmed/36891219
http://dx.doi.org/10.3389/fchem.2023.1126177
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