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A single strand: A simplified approach to DNA origami
Just as a single polypeptide strand can self-fold into a complex 3D structure, a single strand of DNA can self-fold into DNA origami. Most DNA origami structures (i.e., the scaffold-staple and DNA tiling systems) utilize hundreds of short single-stranded DNA. As such, these structures come with chal...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9986268/ https://www.ncbi.nlm.nih.gov/pubmed/36891219 http://dx.doi.org/10.3389/fchem.2023.1126177 |
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author | Yang, Micah Bakker, David Raghu, Dyuti Li, Isaac T. S. |
author_facet | Yang, Micah Bakker, David Raghu, Dyuti Li, Isaac T. S. |
author_sort | Yang, Micah |
collection | PubMed |
description | Just as a single polypeptide strand can self-fold into a complex 3D structure, a single strand of DNA can self-fold into DNA origami. Most DNA origami structures (i.e., the scaffold-staple and DNA tiling systems) utilize hundreds of short single-stranded DNA. As such, these structures come with challenges inherent to intermolecular construction. Many assembly challenges involving intermolecular interactions can be resolved if the origami structure is constructed from one DNA strand, where folding is not concentration dependent, the folded structure is more resistant to nuclease degradation, and the synthesis can be achieved at an industrial scale at a thousandth of the cost. This review discusses the design principles and considerations employed in single-stranded DNA origami and its potential benefits and drawbacks. |
format | Online Article Text |
id | pubmed-9986268 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-99862682023-03-07 A single strand: A simplified approach to DNA origami Yang, Micah Bakker, David Raghu, Dyuti Li, Isaac T. S. Front Chem Chemistry Just as a single polypeptide strand can self-fold into a complex 3D structure, a single strand of DNA can self-fold into DNA origami. Most DNA origami structures (i.e., the scaffold-staple and DNA tiling systems) utilize hundreds of short single-stranded DNA. As such, these structures come with challenges inherent to intermolecular construction. Many assembly challenges involving intermolecular interactions can be resolved if the origami structure is constructed from one DNA strand, where folding is not concentration dependent, the folded structure is more resistant to nuclease degradation, and the synthesis can be achieved at an industrial scale at a thousandth of the cost. This review discusses the design principles and considerations employed in single-stranded DNA origami and its potential benefits and drawbacks. Frontiers Media S.A. 2023-02-20 /pmc/articles/PMC9986268/ /pubmed/36891219 http://dx.doi.org/10.3389/fchem.2023.1126177 Text en Copyright © 2023 Yang, Bakker, Raghu and Li. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Chemistry Yang, Micah Bakker, David Raghu, Dyuti Li, Isaac T. S. A single strand: A simplified approach to DNA origami |
title | A single strand: A simplified approach to DNA origami |
title_full | A single strand: A simplified approach to DNA origami |
title_fullStr | A single strand: A simplified approach to DNA origami |
title_full_unstemmed | A single strand: A simplified approach to DNA origami |
title_short | A single strand: A simplified approach to DNA origami |
title_sort | single strand: a simplified approach to dna origami |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9986268/ https://www.ncbi.nlm.nih.gov/pubmed/36891219 http://dx.doi.org/10.3389/fchem.2023.1126177 |
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