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Exploring multivalent carbohydrate–protein interactions by NMR
Nuclear Magnetic Resonance (NMR) has been widely employed to assess diverse features of glycan–protein molecular recognition events. Different types of qualitative and quantitative information at different degrees of resolution and complexity can be extracted from the proper application of the avail...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9987413/ https://www.ncbi.nlm.nih.gov/pubmed/36753338 http://dx.doi.org/10.1039/d2cs00983h |
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author | Quintana, Jon I. Atxabal, Unai Unione, Luca Ardá, Ana Jiménez-Barbero, Jesús |
author_facet | Quintana, Jon I. Atxabal, Unai Unione, Luca Ardá, Ana Jiménez-Barbero, Jesús |
author_sort | Quintana, Jon I. |
collection | PubMed |
description | Nuclear Magnetic Resonance (NMR) has been widely employed to assess diverse features of glycan–protein molecular recognition events. Different types of qualitative and quantitative information at different degrees of resolution and complexity can be extracted from the proper application of the available NMR-techniques. In fact, affinity, structural, kinetic, conformational, and dynamic characteristics of the binding process are available. Nevertheless, except in particular cases, the affinity of lectin-sugar interactions is weak, mostly at the low mM range. This feature is overcome in biological processes by using multivalency, thus augmenting the strength of the binding. However, the application of NMR methods to monitor multivalent lectin–glycan interactions is intrinsically challenging. It is well known that when large macromolecular complexes are formed, the NMR signals disappear from the NMR spectrum, due to the existence of fast transverse relaxation, related to the large size and exchange features. Indeed, at the heart of the molecular recognition event, the associated free-bound chemical exchange process for both partners takes place in a particular timescale. Thus, these factors have to be considered and overcome. In this review article, we have distinguished, in a subjective manner, the existence of multivalent presentations in the glycan or in the lectin. From the glycan perspective, we have also considered whether multiple epitopes of a given ligand are presented in the same linear chain of a saccharide (i.e., poly-LacNAc oligosaccharides) or decorating different arms of a multiantennae scaffold, either natural (as in multiantennae N-glycans) or synthetic (of dendrimer or polymer nature). From the lectin perspective, the presence of an individual binding site at every monomer of a multimeric lectin may also have key consequences for the binding event at different levels of complexity. |
format | Online Article Text |
id | pubmed-9987413 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-99874132023-03-07 Exploring multivalent carbohydrate–protein interactions by NMR Quintana, Jon I. Atxabal, Unai Unione, Luca Ardá, Ana Jiménez-Barbero, Jesús Chem Soc Rev Chemistry Nuclear Magnetic Resonance (NMR) has been widely employed to assess diverse features of glycan–protein molecular recognition events. Different types of qualitative and quantitative information at different degrees of resolution and complexity can be extracted from the proper application of the available NMR-techniques. In fact, affinity, structural, kinetic, conformational, and dynamic characteristics of the binding process are available. Nevertheless, except in particular cases, the affinity of lectin-sugar interactions is weak, mostly at the low mM range. This feature is overcome in biological processes by using multivalency, thus augmenting the strength of the binding. However, the application of NMR methods to monitor multivalent lectin–glycan interactions is intrinsically challenging. It is well known that when large macromolecular complexes are formed, the NMR signals disappear from the NMR spectrum, due to the existence of fast transverse relaxation, related to the large size and exchange features. Indeed, at the heart of the molecular recognition event, the associated free-bound chemical exchange process for both partners takes place in a particular timescale. Thus, these factors have to be considered and overcome. In this review article, we have distinguished, in a subjective manner, the existence of multivalent presentations in the glycan or in the lectin. From the glycan perspective, we have also considered whether multiple epitopes of a given ligand are presented in the same linear chain of a saccharide (i.e., poly-LacNAc oligosaccharides) or decorating different arms of a multiantennae scaffold, either natural (as in multiantennae N-glycans) or synthetic (of dendrimer or polymer nature). From the lectin perspective, the presence of an individual binding site at every monomer of a multimeric lectin may also have key consequences for the binding event at different levels of complexity. The Royal Society of Chemistry 2023-02-08 /pmc/articles/PMC9987413/ /pubmed/36753338 http://dx.doi.org/10.1039/d2cs00983h Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/ |
spellingShingle | Chemistry Quintana, Jon I. Atxabal, Unai Unione, Luca Ardá, Ana Jiménez-Barbero, Jesús Exploring multivalent carbohydrate–protein interactions by NMR |
title | Exploring multivalent carbohydrate–protein interactions by NMR |
title_full | Exploring multivalent carbohydrate–protein interactions by NMR |
title_fullStr | Exploring multivalent carbohydrate–protein interactions by NMR |
title_full_unstemmed | Exploring multivalent carbohydrate–protein interactions by NMR |
title_short | Exploring multivalent carbohydrate–protein interactions by NMR |
title_sort | exploring multivalent carbohydrate–protein interactions by nmr |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9987413/ https://www.ncbi.nlm.nih.gov/pubmed/36753338 http://dx.doi.org/10.1039/d2cs00983h |
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