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The TFIIS N-terminal domain (TND): a transcription assembly module at the interface of order and disorder

Interaction scaffolds that selectively recognize disordered protein strongly shape protein interactomes. An important scaffold of this type that contributes to transcription is the TFIIS N-terminal domain (TND). The TND is a five-helical bundle that has no known enzymatic activity, but instead selec...

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Detalles Bibliográficos
Autores principales: Cermakova, Katerina, Veverka, Vaclav, Hodges, H. Courtney
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Portland Press Ltd. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9987994/
https://www.ncbi.nlm.nih.gov/pubmed/36651856
http://dx.doi.org/10.1042/BST20220342
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author Cermakova, Katerina
Veverka, Vaclav
Hodges, H. Courtney
author_facet Cermakova, Katerina
Veverka, Vaclav
Hodges, H. Courtney
author_sort Cermakova, Katerina
collection PubMed
description Interaction scaffolds that selectively recognize disordered protein strongly shape protein interactomes. An important scaffold of this type that contributes to transcription is the TFIIS N-terminal domain (TND). The TND is a five-helical bundle that has no known enzymatic activity, but instead selectively reads intrinsically disordered sequences of other proteins. Here, we review the structural and functional properties of TNDs and their cognate disordered ligands known as TND-interacting motifs (TIMs). TNDs or TIMs are found in prominent members of the transcription machinery, including TFIIS, super elongation complex, SWI/SNF, Mediator, IWS1, SPT6, PP1-PNUTS phosphatase, elongin, H3K36me3 readers, the transcription factor MYC, and others. We also review how the TND interactome contributes to the regulation of transcription. Because the TND is the most significantly enriched fold among transcription elongation regulators, TND- and TIM-driven interactions have widespread roles in the regulation of many transcriptional processes.
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spelling pubmed-99879942023-03-07 The TFIIS N-terminal domain (TND): a transcription assembly module at the interface of order and disorder Cermakova, Katerina Veverka, Vaclav Hodges, H. Courtney Biochem Soc Trans Review Articles Interaction scaffolds that selectively recognize disordered protein strongly shape protein interactomes. An important scaffold of this type that contributes to transcription is the TFIIS N-terminal domain (TND). The TND is a five-helical bundle that has no known enzymatic activity, but instead selectively reads intrinsically disordered sequences of other proteins. Here, we review the structural and functional properties of TNDs and their cognate disordered ligands known as TND-interacting motifs (TIMs). TNDs or TIMs are found in prominent members of the transcription machinery, including TFIIS, super elongation complex, SWI/SNF, Mediator, IWS1, SPT6, PP1-PNUTS phosphatase, elongin, H3K36me3 readers, the transcription factor MYC, and others. We also review how the TND interactome contributes to the regulation of transcription. Because the TND is the most significantly enriched fold among transcription elongation regulators, TND- and TIM-driven interactions have widespread roles in the regulation of many transcriptional processes. Portland Press Ltd. 2023-02-27 2023-01-18 /pmc/articles/PMC9987994/ /pubmed/36651856 http://dx.doi.org/10.1042/BST20220342 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) .
spellingShingle Review Articles
Cermakova, Katerina
Veverka, Vaclav
Hodges, H. Courtney
The TFIIS N-terminal domain (TND): a transcription assembly module at the interface of order and disorder
title The TFIIS N-terminal domain (TND): a transcription assembly module at the interface of order and disorder
title_full The TFIIS N-terminal domain (TND): a transcription assembly module at the interface of order and disorder
title_fullStr The TFIIS N-terminal domain (TND): a transcription assembly module at the interface of order and disorder
title_full_unstemmed The TFIIS N-terminal domain (TND): a transcription assembly module at the interface of order and disorder
title_short The TFIIS N-terminal domain (TND): a transcription assembly module at the interface of order and disorder
title_sort tfiis n-terminal domain (tnd): a transcription assembly module at the interface of order and disorder
topic Review Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9987994/
https://www.ncbi.nlm.nih.gov/pubmed/36651856
http://dx.doi.org/10.1042/BST20220342
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