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The genetic contribution of the X chromosome in age-related hearing loss

Age-related (AR) hearing loss (HL) is the most common sensory impairment with heritability of 55%. The aim of this study was to identify genetic variants on chromosome X associated with ARHL through the analysis of data obtained from the UK Biobank. We performed association analysis between self-rep...

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Autores principales: Naderi, Elnaz, Cornejo-Sanchez, Diana M., Li, Guangyou, Schrauwen, Isabelle, Wang, Gao T., Dewan, Andrew T., Leal, Suzanne M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9988903/
https://www.ncbi.nlm.nih.gov/pubmed/36896235
http://dx.doi.org/10.3389/fgene.2023.1106328
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author Naderi, Elnaz
Cornejo-Sanchez, Diana M.
Li, Guangyou
Schrauwen, Isabelle
Wang, Gao T.
Dewan, Andrew T.
Leal, Suzanne M.
author_facet Naderi, Elnaz
Cornejo-Sanchez, Diana M.
Li, Guangyou
Schrauwen, Isabelle
Wang, Gao T.
Dewan, Andrew T.
Leal, Suzanne M.
author_sort Naderi, Elnaz
collection PubMed
description Age-related (AR) hearing loss (HL) is the most common sensory impairment with heritability of 55%. The aim of this study was to identify genetic variants on chromosome X associated with ARHL through the analysis of data obtained from the UK Biobank. We performed association analysis between self-reported measures of HL and genotyped and imputed variants on chromosome X from ∼460,000 white Europeans. We identified three loci associated with ARHL with a genome-wide significance level (p < 5 × 10(−8)), ZNF185 (rs186256023, p = 4.9 × 10(−10)) and MAP7D2 (rs4370706, p = 2.3 × 10(−8)) in combined analysis of males and females, and LOC101928437 (rs138497700, p = 8.9 × 10(−9)) in the sex-stratified analysis of males. In-silico mRNA expression analysis showed MAP7D2 and ZNF185 are expressed in mice and adult human inner ear tissues, particularly in the inner hair cells. We estimated that only a small amount of variation of ARHL, 0.4%, is explained by variants on the X chromosome. This study suggests that although there are likely a few genes contributing to ARHL on the X chromosome, the role that the X chromosome plays in the etiology of ARHL may be limited.
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spelling pubmed-99889032023-03-08 The genetic contribution of the X chromosome in age-related hearing loss Naderi, Elnaz Cornejo-Sanchez, Diana M. Li, Guangyou Schrauwen, Isabelle Wang, Gao T. Dewan, Andrew T. Leal, Suzanne M. Front Genet Genetics Age-related (AR) hearing loss (HL) is the most common sensory impairment with heritability of 55%. The aim of this study was to identify genetic variants on chromosome X associated with ARHL through the analysis of data obtained from the UK Biobank. We performed association analysis between self-reported measures of HL and genotyped and imputed variants on chromosome X from ∼460,000 white Europeans. We identified three loci associated with ARHL with a genome-wide significance level (p < 5 × 10(−8)), ZNF185 (rs186256023, p = 4.9 × 10(−10)) and MAP7D2 (rs4370706, p = 2.3 × 10(−8)) in combined analysis of males and females, and LOC101928437 (rs138497700, p = 8.9 × 10(−9)) in the sex-stratified analysis of males. In-silico mRNA expression analysis showed MAP7D2 and ZNF185 are expressed in mice and adult human inner ear tissues, particularly in the inner hair cells. We estimated that only a small amount of variation of ARHL, 0.4%, is explained by variants on the X chromosome. This study suggests that although there are likely a few genes contributing to ARHL on the X chromosome, the role that the X chromosome plays in the etiology of ARHL may be limited. Frontiers Media S.A. 2023-02-21 /pmc/articles/PMC9988903/ /pubmed/36896235 http://dx.doi.org/10.3389/fgene.2023.1106328 Text en Copyright © 2023 Naderi, Cornejo-Sanchez, Li, Schrauwen, Wang, Dewan and Leal. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Naderi, Elnaz
Cornejo-Sanchez, Diana M.
Li, Guangyou
Schrauwen, Isabelle
Wang, Gao T.
Dewan, Andrew T.
Leal, Suzanne M.
The genetic contribution of the X chromosome in age-related hearing loss
title The genetic contribution of the X chromosome in age-related hearing loss
title_full The genetic contribution of the X chromosome in age-related hearing loss
title_fullStr The genetic contribution of the X chromosome in age-related hearing loss
title_full_unstemmed The genetic contribution of the X chromosome in age-related hearing loss
title_short The genetic contribution of the X chromosome in age-related hearing loss
title_sort genetic contribution of the x chromosome in age-related hearing loss
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9988903/
https://www.ncbi.nlm.nih.gov/pubmed/36896235
http://dx.doi.org/10.3389/fgene.2023.1106328
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