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Multi-center Integrating Radiomics, Structured Reports, and Machine Learning Algorithms for Assisted Classification of COVID-19 in Lung Computed Tomography

PURPOSE: To evaluate the classification performance of structured report features, radiomics, and machine learning (ML) models to differentiate between Coronavirus Disease 2019 (COVID-19) and other types of pneumonia using chest computed tomography (CT) scans. METHODS: Sixty-four COVID-19 subjects a...

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Autores principales: Machado, Marcos A. D., Silva, Ronnyldo R. E., Namias, Mauro, Lessa, Andreia S., Neves, Margarida C. L. C., Silva, Carolina T. A., Oliveira, Danillo M., Reina, Thamiris R., Lira, Arquimedes A. B., Almeida, Leandro M., Zanchettin, Cleber, Netto, Eduardo M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9990550/
https://www.ncbi.nlm.nih.gov/pubmed/37077697
http://dx.doi.org/10.1007/s40846-023-00781-4
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author Machado, Marcos A. D.
Silva, Ronnyldo R. E.
Namias, Mauro
Lessa, Andreia S.
Neves, Margarida C. L. C.
Silva, Carolina T. A.
Oliveira, Danillo M.
Reina, Thamiris R.
Lira, Arquimedes A. B.
Almeida, Leandro M.
Zanchettin, Cleber
Netto, Eduardo M.
author_facet Machado, Marcos A. D.
Silva, Ronnyldo R. E.
Namias, Mauro
Lessa, Andreia S.
Neves, Margarida C. L. C.
Silva, Carolina T. A.
Oliveira, Danillo M.
Reina, Thamiris R.
Lira, Arquimedes A. B.
Almeida, Leandro M.
Zanchettin, Cleber
Netto, Eduardo M.
author_sort Machado, Marcos A. D.
collection PubMed
description PURPOSE: To evaluate the classification performance of structured report features, radiomics, and machine learning (ML) models to differentiate between Coronavirus Disease 2019 (COVID-19) and other types of pneumonia using chest computed tomography (CT) scans. METHODS: Sixty-four COVID-19 subjects and 64 subjects with non-COVID-19 pneumonia were selected. The data was split into two independent cohorts: one for the structured report, radiomic feature selection and model building (n = 73), and another for model validation (n = 55). Physicians performed readings with and without machine learning support. The model's sensitivity and specificity were calculated, and inter-rater reliability was assessed using Cohen’s Kappa agreement coefficient. RESULTS: Physicians performed with mean sensitivity and specificity of 83.4 and 64.3%, respectively. When assisted with machine learning, the mean sensitivity and specificity increased to 87.1 and 91.1%, respectively. In addition, machine learning improved the inter-rater reliability from moderate to substantial. CONCLUSION: Integrating structured reports and radiomics promises assisted classification of COVID-19 in CT chest scans.
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spelling pubmed-99905502023-03-08 Multi-center Integrating Radiomics, Structured Reports, and Machine Learning Algorithms for Assisted Classification of COVID-19 in Lung Computed Tomography Machado, Marcos A. D. Silva, Ronnyldo R. E. Namias, Mauro Lessa, Andreia S. Neves, Margarida C. L. C. Silva, Carolina T. A. Oliveira, Danillo M. Reina, Thamiris R. Lira, Arquimedes A. B. Almeida, Leandro M. Zanchettin, Cleber Netto, Eduardo M. J Med Biol Eng Original Article PURPOSE: To evaluate the classification performance of structured report features, radiomics, and machine learning (ML) models to differentiate between Coronavirus Disease 2019 (COVID-19) and other types of pneumonia using chest computed tomography (CT) scans. METHODS: Sixty-four COVID-19 subjects and 64 subjects with non-COVID-19 pneumonia were selected. The data was split into two independent cohorts: one for the structured report, radiomic feature selection and model building (n = 73), and another for model validation (n = 55). Physicians performed readings with and without machine learning support. The model's sensitivity and specificity were calculated, and inter-rater reliability was assessed using Cohen’s Kappa agreement coefficient. RESULTS: Physicians performed with mean sensitivity and specificity of 83.4 and 64.3%, respectively. When assisted with machine learning, the mean sensitivity and specificity increased to 87.1 and 91.1%, respectively. In addition, machine learning improved the inter-rater reliability from moderate to substantial. CONCLUSION: Integrating structured reports and radiomics promises assisted classification of COVID-19 in CT chest scans. Springer Berlin Heidelberg 2023-03-07 2023 /pmc/articles/PMC9990550/ /pubmed/37077697 http://dx.doi.org/10.1007/s40846-023-00781-4 Text en © Taiwanese Society of Biomedical Engineering 2023, Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Original Article
Machado, Marcos A. D.
Silva, Ronnyldo R. E.
Namias, Mauro
Lessa, Andreia S.
Neves, Margarida C. L. C.
Silva, Carolina T. A.
Oliveira, Danillo M.
Reina, Thamiris R.
Lira, Arquimedes A. B.
Almeida, Leandro M.
Zanchettin, Cleber
Netto, Eduardo M.
Multi-center Integrating Radiomics, Structured Reports, and Machine Learning Algorithms for Assisted Classification of COVID-19 in Lung Computed Tomography
title Multi-center Integrating Radiomics, Structured Reports, and Machine Learning Algorithms for Assisted Classification of COVID-19 in Lung Computed Tomography
title_full Multi-center Integrating Radiomics, Structured Reports, and Machine Learning Algorithms for Assisted Classification of COVID-19 in Lung Computed Tomography
title_fullStr Multi-center Integrating Radiomics, Structured Reports, and Machine Learning Algorithms for Assisted Classification of COVID-19 in Lung Computed Tomography
title_full_unstemmed Multi-center Integrating Radiomics, Structured Reports, and Machine Learning Algorithms for Assisted Classification of COVID-19 in Lung Computed Tomography
title_short Multi-center Integrating Radiomics, Structured Reports, and Machine Learning Algorithms for Assisted Classification of COVID-19 in Lung Computed Tomography
title_sort multi-center integrating radiomics, structured reports, and machine learning algorithms for assisted classification of covid-19 in lung computed tomography
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9990550/
https://www.ncbi.nlm.nih.gov/pubmed/37077697
http://dx.doi.org/10.1007/s40846-023-00781-4
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