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A densely interconnected network for deep learning accelerated MRI
OBJECTIVE: To improve accelerated MRI reconstruction through a densely connected cascading deep learning reconstruction framework. MATERIALS AND METHODS: A cascading deep learning reconstruction framework (reference model) was modified by applying three architectural modifications: input-level dense...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9992260/ https://www.ncbi.nlm.nih.gov/pubmed/36103029 http://dx.doi.org/10.1007/s10334-022-01041-3 |
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author | Ottesen, Jon André Caan, Matthan W. A. Groote, Inge Rasmus Bjørnerud, Atle |
author_facet | Ottesen, Jon André Caan, Matthan W. A. Groote, Inge Rasmus Bjørnerud, Atle |
author_sort | Ottesen, Jon André |
collection | PubMed |
description | OBJECTIVE: To improve accelerated MRI reconstruction through a densely connected cascading deep learning reconstruction framework. MATERIALS AND METHODS: A cascading deep learning reconstruction framework (reference model) was modified by applying three architectural modifications: input-level dense connections between cascade inputs and outputs, an improved deep learning sub-network, and long-range skip-connections between subsequent deep learning networks. An ablation study was performed, where five model configurations were trained on the NYU fastMRI neuro dataset with an end-to-end scheme conjunct on four- and eightfold acceleration. The trained models were evaluated by comparing their respective structural similarity index measure (SSIM), normalized mean square error (NMSE), and peak signal to noise ratio (PSNR). RESULTS: The proposed densely interconnected residual cascading network (DIRCN), utilizing all three suggested modifications achieved a SSIM improvement of 8% and 11%, a NMSE improvement of 14% and 23%, and a PSNR improvement of 2% and 3% for four- and eightfold acceleration, respectively. In an ablation study, the individual architectural modifications all contributed to this improvement for both acceleration factors, by improving the SSIM, NMSE, and PSNR with approximately 2–4%, 4–9%, and 0.5–1%, respectively. CONCLUSION: The proposed architectural modifications allow for simple adjustments on an already existing cascading framework to further improve the resulting reconstructions. |
format | Online Article Text |
id | pubmed-9992260 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-99922602023-03-09 A densely interconnected network for deep learning accelerated MRI Ottesen, Jon André Caan, Matthan W. A. Groote, Inge Rasmus Bjørnerud, Atle MAGMA Research Article OBJECTIVE: To improve accelerated MRI reconstruction through a densely connected cascading deep learning reconstruction framework. MATERIALS AND METHODS: A cascading deep learning reconstruction framework (reference model) was modified by applying three architectural modifications: input-level dense connections between cascade inputs and outputs, an improved deep learning sub-network, and long-range skip-connections between subsequent deep learning networks. An ablation study was performed, where five model configurations were trained on the NYU fastMRI neuro dataset with an end-to-end scheme conjunct on four- and eightfold acceleration. The trained models were evaluated by comparing their respective structural similarity index measure (SSIM), normalized mean square error (NMSE), and peak signal to noise ratio (PSNR). RESULTS: The proposed densely interconnected residual cascading network (DIRCN), utilizing all three suggested modifications achieved a SSIM improvement of 8% and 11%, a NMSE improvement of 14% and 23%, and a PSNR improvement of 2% and 3% for four- and eightfold acceleration, respectively. In an ablation study, the individual architectural modifications all contributed to this improvement for both acceleration factors, by improving the SSIM, NMSE, and PSNR with approximately 2–4%, 4–9%, and 0.5–1%, respectively. CONCLUSION: The proposed architectural modifications allow for simple adjustments on an already existing cascading framework to further improve the resulting reconstructions. Springer International Publishing 2022-09-14 2023 /pmc/articles/PMC9992260/ /pubmed/36103029 http://dx.doi.org/10.1007/s10334-022-01041-3 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Article Ottesen, Jon André Caan, Matthan W. A. Groote, Inge Rasmus Bjørnerud, Atle A densely interconnected network for deep learning accelerated MRI |
title | A densely interconnected network for deep learning accelerated MRI |
title_full | A densely interconnected network for deep learning accelerated MRI |
title_fullStr | A densely interconnected network for deep learning accelerated MRI |
title_full_unstemmed | A densely interconnected network for deep learning accelerated MRI |
title_short | A densely interconnected network for deep learning accelerated MRI |
title_sort | densely interconnected network for deep learning accelerated mri |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9992260/ https://www.ncbi.nlm.nih.gov/pubmed/36103029 http://dx.doi.org/10.1007/s10334-022-01041-3 |
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