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A densely interconnected network for deep learning accelerated MRI

OBJECTIVE: To improve accelerated MRI reconstruction through a densely connected cascading deep learning reconstruction framework. MATERIALS AND METHODS: A cascading deep learning reconstruction framework (reference model) was modified by applying three architectural modifications: input-level dense...

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Autores principales: Ottesen, Jon André, Caan, Matthan W. A., Groote, Inge Rasmus, Bjørnerud, Atle
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9992260/
https://www.ncbi.nlm.nih.gov/pubmed/36103029
http://dx.doi.org/10.1007/s10334-022-01041-3
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author Ottesen, Jon André
Caan, Matthan W. A.
Groote, Inge Rasmus
Bjørnerud, Atle
author_facet Ottesen, Jon André
Caan, Matthan W. A.
Groote, Inge Rasmus
Bjørnerud, Atle
author_sort Ottesen, Jon André
collection PubMed
description OBJECTIVE: To improve accelerated MRI reconstruction through a densely connected cascading deep learning reconstruction framework. MATERIALS AND METHODS: A cascading deep learning reconstruction framework (reference model) was modified by applying three architectural modifications: input-level dense connections between cascade inputs and outputs, an improved deep learning sub-network, and long-range skip-connections between subsequent deep learning networks. An ablation study was performed, where five model configurations were trained on the NYU fastMRI neuro dataset with an end-to-end scheme conjunct on four- and eightfold acceleration. The trained models were evaluated by comparing their respective structural similarity index measure (SSIM), normalized mean square error (NMSE), and peak signal to noise ratio (PSNR). RESULTS: The proposed densely interconnected residual cascading network (DIRCN), utilizing all three suggested modifications achieved a SSIM improvement of 8% and 11%, a NMSE improvement of 14% and 23%, and a PSNR improvement of 2% and 3% for four- and eightfold acceleration, respectively. In an ablation study, the individual architectural modifications all contributed to this improvement for both acceleration factors, by improving the SSIM, NMSE, and PSNR with approximately 2–4%, 4–9%, and 0.5–1%, respectively. CONCLUSION: The proposed architectural modifications allow for simple adjustments on an already existing cascading framework to further improve the resulting reconstructions.
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spelling pubmed-99922602023-03-09 A densely interconnected network for deep learning accelerated MRI Ottesen, Jon André Caan, Matthan W. A. Groote, Inge Rasmus Bjørnerud, Atle MAGMA Research Article OBJECTIVE: To improve accelerated MRI reconstruction through a densely connected cascading deep learning reconstruction framework. MATERIALS AND METHODS: A cascading deep learning reconstruction framework (reference model) was modified by applying three architectural modifications: input-level dense connections between cascade inputs and outputs, an improved deep learning sub-network, and long-range skip-connections between subsequent deep learning networks. An ablation study was performed, where five model configurations were trained on the NYU fastMRI neuro dataset with an end-to-end scheme conjunct on four- and eightfold acceleration. The trained models were evaluated by comparing their respective structural similarity index measure (SSIM), normalized mean square error (NMSE), and peak signal to noise ratio (PSNR). RESULTS: The proposed densely interconnected residual cascading network (DIRCN), utilizing all three suggested modifications achieved a SSIM improvement of 8% and 11%, a NMSE improvement of 14% and 23%, and a PSNR improvement of 2% and 3% for four- and eightfold acceleration, respectively. In an ablation study, the individual architectural modifications all contributed to this improvement for both acceleration factors, by improving the SSIM, NMSE, and PSNR with approximately 2–4%, 4–9%, and 0.5–1%, respectively. CONCLUSION: The proposed architectural modifications allow for simple adjustments on an already existing cascading framework to further improve the resulting reconstructions. Springer International Publishing 2022-09-14 2023 /pmc/articles/PMC9992260/ /pubmed/36103029 http://dx.doi.org/10.1007/s10334-022-01041-3 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Research Article
Ottesen, Jon André
Caan, Matthan W. A.
Groote, Inge Rasmus
Bjørnerud, Atle
A densely interconnected network for deep learning accelerated MRI
title A densely interconnected network for deep learning accelerated MRI
title_full A densely interconnected network for deep learning accelerated MRI
title_fullStr A densely interconnected network for deep learning accelerated MRI
title_full_unstemmed A densely interconnected network for deep learning accelerated MRI
title_short A densely interconnected network for deep learning accelerated MRI
title_sort densely interconnected network for deep learning accelerated mri
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9992260/
https://www.ncbi.nlm.nih.gov/pubmed/36103029
http://dx.doi.org/10.1007/s10334-022-01041-3
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