Cargando…
The relationship between tumor infiltrating immune cells and the prognosis of patients with lung adenocarcinoma
BACKGROUND: To depict the immune infiltration characteristics of tumor cells in patients with lung adenocarcinoma (LUAD) and evaluate the predictive value and significance of tumor immune cells on the prognosis of LUAD patients. METHODS: The clinical characteristics and transcriptome of LUAD patient...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AME Publishing Company
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9992595/ https://www.ncbi.nlm.nih.gov/pubmed/36910049 http://dx.doi.org/10.21037/jtd-22-1837 |
_version_ | 1784902347091083264 |
---|---|
author | Tong, Zhuang Wang, Xu Liu, Hongyu Ding, Jian Chu, Yinling Zhou, Xin |
author_facet | Tong, Zhuang Wang, Xu Liu, Hongyu Ding, Jian Chu, Yinling Zhou, Xin |
author_sort | Tong, Zhuang |
collection | PubMed |
description | BACKGROUND: To depict the immune infiltration characteristics of tumor cells in patients with lung adenocarcinoma (LUAD) and evaluate the predictive value and significance of tumor immune cells on the prognosis of LUAD patients. METHODS: The clinical characteristics and transcriptome of LUAD patients were obtained from The Cancer Genome Atlas (TCGA), and the immune cell abundance in LUAD tissue was evaluated using the CIBERSORT algorithm. We created a simplified immune cell-based Cox regression model according to the survival status of patients and clarified the correlation between the survival status of patients and seven types of immune cells. An immune cell-based risk prediction model was created by Cox proportional hazards regression. Subsequently, the gene expression profile of LUAD patients was obtained from the Gene Expression Omnibus (GEO) database to validate the tumor immune infiltration and patient prognosis prediction model attained using the CIBERSORT algorithm. RESULTS: The abundance of 22 tumor-infiltrating immune cells in these patients was detected using the CIBERSORT algorithm. According to Pearson correlation analysis, the immune cells appeared to be closely related to each other. The immune cell composition was remarkably different between the LUAD tumor tissue and paracancerous tissue. The simplified COX model showed that seven kinds of immune cells have predictive value for the prognosis and survival status of LUAD. The receiver operating characteristic curve (ROC) curve confirmed that the prediction model performed well for 1-, 3-, and 5-year survival status. The calibration curve suggested that the prediction model was consistent with the clinical results. Correlation analysis revealed that the clinical features were significantly related to immune cell infiltration. A total of 246 LUAD specimens were from the GEO database, and the risk score model suggested that high risk scores were indicative of a poor prognosis. Finally, enzyme-linked immunosorbent assay (ELISA) revealed that the expressions of tumor necrosis factor-α (TNF-α), interleukin 8 (IL-8), IL-6, and interferon-γ (IFN-γ) in tumor tissues were remarkably higher compared with those in adjacent tissues. CONCLUSIONS: There is a close correlation between the tumor-infiltrating immune cells and the prognosis and clinical characteristics of LUAD patients. The risk score model based on TCGA and GEO designed in this study can be applied in clinical practice. |
format | Online Article Text |
id | pubmed-9992595 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | AME Publishing Company |
record_format | MEDLINE/PubMed |
spelling | pubmed-99925952023-03-09 The relationship between tumor infiltrating immune cells and the prognosis of patients with lung adenocarcinoma Tong, Zhuang Wang, Xu Liu, Hongyu Ding, Jian Chu, Yinling Zhou, Xin J Thorac Dis Original Article BACKGROUND: To depict the immune infiltration characteristics of tumor cells in patients with lung adenocarcinoma (LUAD) and evaluate the predictive value and significance of tumor immune cells on the prognosis of LUAD patients. METHODS: The clinical characteristics and transcriptome of LUAD patients were obtained from The Cancer Genome Atlas (TCGA), and the immune cell abundance in LUAD tissue was evaluated using the CIBERSORT algorithm. We created a simplified immune cell-based Cox regression model according to the survival status of patients and clarified the correlation between the survival status of patients and seven types of immune cells. An immune cell-based risk prediction model was created by Cox proportional hazards regression. Subsequently, the gene expression profile of LUAD patients was obtained from the Gene Expression Omnibus (GEO) database to validate the tumor immune infiltration and patient prognosis prediction model attained using the CIBERSORT algorithm. RESULTS: The abundance of 22 tumor-infiltrating immune cells in these patients was detected using the CIBERSORT algorithm. According to Pearson correlation analysis, the immune cells appeared to be closely related to each other. The immune cell composition was remarkably different between the LUAD tumor tissue and paracancerous tissue. The simplified COX model showed that seven kinds of immune cells have predictive value for the prognosis and survival status of LUAD. The receiver operating characteristic curve (ROC) curve confirmed that the prediction model performed well for 1-, 3-, and 5-year survival status. The calibration curve suggested that the prediction model was consistent with the clinical results. Correlation analysis revealed that the clinical features were significantly related to immune cell infiltration. A total of 246 LUAD specimens were from the GEO database, and the risk score model suggested that high risk scores were indicative of a poor prognosis. Finally, enzyme-linked immunosorbent assay (ELISA) revealed that the expressions of tumor necrosis factor-α (TNF-α), interleukin 8 (IL-8), IL-6, and interferon-γ (IFN-γ) in tumor tissues were remarkably higher compared with those in adjacent tissues. CONCLUSIONS: There is a close correlation between the tumor-infiltrating immune cells and the prognosis and clinical characteristics of LUAD patients. The risk score model based on TCGA and GEO designed in this study can be applied in clinical practice. AME Publishing Company 2023-02-28 2023-02-28 /pmc/articles/PMC9992595/ /pubmed/36910049 http://dx.doi.org/10.21037/jtd-22-1837 Text en 2023 Journal of Thoracic Disease. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Original Article Tong, Zhuang Wang, Xu Liu, Hongyu Ding, Jian Chu, Yinling Zhou, Xin The relationship between tumor infiltrating immune cells and the prognosis of patients with lung adenocarcinoma |
title | The relationship between tumor infiltrating immune cells and the prognosis of patients with lung adenocarcinoma |
title_full | The relationship between tumor infiltrating immune cells and the prognosis of patients with lung adenocarcinoma |
title_fullStr | The relationship between tumor infiltrating immune cells and the prognosis of patients with lung adenocarcinoma |
title_full_unstemmed | The relationship between tumor infiltrating immune cells and the prognosis of patients with lung adenocarcinoma |
title_short | The relationship between tumor infiltrating immune cells and the prognosis of patients with lung adenocarcinoma |
title_sort | relationship between tumor infiltrating immune cells and the prognosis of patients with lung adenocarcinoma |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9992595/ https://www.ncbi.nlm.nih.gov/pubmed/36910049 http://dx.doi.org/10.21037/jtd-22-1837 |
work_keys_str_mv | AT tongzhuang therelationshipbetweentumorinfiltratingimmunecellsandtheprognosisofpatientswithlungadenocarcinoma AT wangxu therelationshipbetweentumorinfiltratingimmunecellsandtheprognosisofpatientswithlungadenocarcinoma AT liuhongyu therelationshipbetweentumorinfiltratingimmunecellsandtheprognosisofpatientswithlungadenocarcinoma AT dingjian therelationshipbetweentumorinfiltratingimmunecellsandtheprognosisofpatientswithlungadenocarcinoma AT chuyinling therelationshipbetweentumorinfiltratingimmunecellsandtheprognosisofpatientswithlungadenocarcinoma AT zhouxin therelationshipbetweentumorinfiltratingimmunecellsandtheprognosisofpatientswithlungadenocarcinoma AT tongzhuang relationshipbetweentumorinfiltratingimmunecellsandtheprognosisofpatientswithlungadenocarcinoma AT wangxu relationshipbetweentumorinfiltratingimmunecellsandtheprognosisofpatientswithlungadenocarcinoma AT liuhongyu relationshipbetweentumorinfiltratingimmunecellsandtheprognosisofpatientswithlungadenocarcinoma AT dingjian relationshipbetweentumorinfiltratingimmunecellsandtheprognosisofpatientswithlungadenocarcinoma AT chuyinling relationshipbetweentumorinfiltratingimmunecellsandtheprognosisofpatientswithlungadenocarcinoma AT zhouxin relationshipbetweentumorinfiltratingimmunecellsandtheprognosisofpatientswithlungadenocarcinoma |