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Rotational dive into the water clusters on a simple sugar substrate
Most biomolecular activity takes place in aqueous environments, and it is strongly influenced by the surrounding water molecules. The hydrogen bond networks that these water molecules form are likewise influenced by their interactions with the solutes, and thus, it is crucial to understand this reci...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
National Academy of Sciences
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9992814/ https://www.ncbi.nlm.nih.gov/pubmed/36802430 http://dx.doi.org/10.1073/pnas.2214970120 |
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author | Steber, Amanda L. Temelso, Berhane Kisiel, Zbigniew Schnell, Melanie Pérez, Cristóbal |
author_facet | Steber, Amanda L. Temelso, Berhane Kisiel, Zbigniew Schnell, Melanie Pérez, Cristóbal |
author_sort | Steber, Amanda L. |
collection | PubMed |
description | Most biomolecular activity takes place in aqueous environments, and it is strongly influenced by the surrounding water molecules. The hydrogen bond networks that these water molecules form are likewise influenced by their interactions with the solutes, and thus, it is crucial to understand this reciprocal process. Glycoaldehyde (Gly), often considered the smallest sugar, represents a good template to explore the steps of solvation and determine how the organic molecule shapes the structure and hydrogen bond network of the solvating water cluster. Here, we report a broadband rotational spectroscopy study on the stepwise hydration of Gly with up to six water molecules. We reveal the preferred hydrogen bond networks formed when water molecules start to form three-dimensional (3D) topologies around an organic molecule. We observe that water self-aggregation prevails even in these early stages of microsolvation. These hydrogen bond networks manifest themselves through the insertion of the small sugar monomer in the pure water cluster in a way in which the oxygen atom framework and hydrogen bond network resemble those of the smallest three-dimensional pure water clusters. Of particular interest is the identification, in both the pentahydrate and hexahydrate, of the previously observed prismatic pure water heptamer motif. Our results show that some specific hydrogen bond networks are preferred and survive the solvation of a small organic molecule, mimicking those of pure water clusters. A many-body decomposition analysis of the interaction energy is also performed to rationalize the strength of a particular hydrogen bond, and it successfully confirms the experimental findings. |
format | Online Article Text |
id | pubmed-9992814 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | National Academy of Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-99928142023-08-21 Rotational dive into the water clusters on a simple sugar substrate Steber, Amanda L. Temelso, Berhane Kisiel, Zbigniew Schnell, Melanie Pérez, Cristóbal Proc Natl Acad Sci U S A Physical Sciences Most biomolecular activity takes place in aqueous environments, and it is strongly influenced by the surrounding water molecules. The hydrogen bond networks that these water molecules form are likewise influenced by their interactions with the solutes, and thus, it is crucial to understand this reciprocal process. Glycoaldehyde (Gly), often considered the smallest sugar, represents a good template to explore the steps of solvation and determine how the organic molecule shapes the structure and hydrogen bond network of the solvating water cluster. Here, we report a broadband rotational spectroscopy study on the stepwise hydration of Gly with up to six water molecules. We reveal the preferred hydrogen bond networks formed when water molecules start to form three-dimensional (3D) topologies around an organic molecule. We observe that water self-aggregation prevails even in these early stages of microsolvation. These hydrogen bond networks manifest themselves through the insertion of the small sugar monomer in the pure water cluster in a way in which the oxygen atom framework and hydrogen bond network resemble those of the smallest three-dimensional pure water clusters. Of particular interest is the identification, in both the pentahydrate and hexahydrate, of the previously observed prismatic pure water heptamer motif. Our results show that some specific hydrogen bond networks are preferred and survive the solvation of a small organic molecule, mimicking those of pure water clusters. A many-body decomposition analysis of the interaction energy is also performed to rationalize the strength of a particular hydrogen bond, and it successfully confirms the experimental findings. National Academy of Sciences 2023-02-21 2023-02-28 /pmc/articles/PMC9992814/ /pubmed/36802430 http://dx.doi.org/10.1073/pnas.2214970120 Text en Copyright © 2023 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/This article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Physical Sciences Steber, Amanda L. Temelso, Berhane Kisiel, Zbigniew Schnell, Melanie Pérez, Cristóbal Rotational dive into the water clusters on a simple sugar substrate |
title | Rotational dive into the water clusters on a simple sugar substrate |
title_full | Rotational dive into the water clusters on a simple sugar substrate |
title_fullStr | Rotational dive into the water clusters on a simple sugar substrate |
title_full_unstemmed | Rotational dive into the water clusters on a simple sugar substrate |
title_short | Rotational dive into the water clusters on a simple sugar substrate |
title_sort | rotational dive into the water clusters on a simple sugar substrate |
topic | Physical Sciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9992814/ https://www.ncbi.nlm.nih.gov/pubmed/36802430 http://dx.doi.org/10.1073/pnas.2214970120 |
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