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Constructing two-level nonlinear mixed-effects crown width models for Moso bamboo in China
Bamboo crown width (CW) is a reliable index for evaluating growth, yield, health and vitality of bamboo, and light capture ability and carbon fixation efficiency of bamboo forests. Based on statistical results produced from fitting the eight basic growth functions using data from 1374 Phyllostachys...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9992983/ https://www.ncbi.nlm.nih.gov/pubmed/36909393 http://dx.doi.org/10.3389/fpls.2023.1139448 |
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author | Zhou, Xiao Li, Zhen Liu, Liyang Sharma, Ram P. Guan, Fengying Fan, Shaohui |
author_facet | Zhou, Xiao Li, Zhen Liu, Liyang Sharma, Ram P. Guan, Fengying Fan, Shaohui |
author_sort | Zhou, Xiao |
collection | PubMed |
description | Bamboo crown width (CW) is a reliable index for evaluating growth, yield, health and vitality of bamboo, and light capture ability and carbon fixation efficiency of bamboo forests. Based on statistical results produced from fitting the eight basic growth functions using data from 1374 Phyllostachys pubescens in Yixing, Jiangsu Province, China, this study identified the most suitable function (logistic function) to construct a two-level mixed effects (NLME) CW model with the forest block and sample plot-level effects included as random effects in the model. Four methods for selecting sample bamboos per sample plot (largest bamboo, medium-sized bamboo, smallest bamboo, and randomly selected bamboos) and eight sample sizes (1–8 selected bamboos per sample plot) were evaluated to calibrate our NLME CW model. Using diameter at breast height (DBH), height to crown base (HCB), arithmetic mean diameter at breast height (MDBH), and height (H) as predictor variables, the model produced the best fit statistics (Max R(2), min RMSE, and TRE). This model was further improved by introducing random effects at two levels. The results showed a positive correlation of CW with HCB and DBH and a negative correlation with H. The smallest two bamboo poles per sample plot used to estimate the random effects of the NLME model provided a satisfactory compromise regarding measurement cost, model efficiency, and prediction accuracy. The presented NLME CW model may guide effective management and carbon estimation of bamboo forests. |
format | Online Article Text |
id | pubmed-9992983 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-99929832023-03-09 Constructing two-level nonlinear mixed-effects crown width models for Moso bamboo in China Zhou, Xiao Li, Zhen Liu, Liyang Sharma, Ram P. Guan, Fengying Fan, Shaohui Front Plant Sci Plant Science Bamboo crown width (CW) is a reliable index for evaluating growth, yield, health and vitality of bamboo, and light capture ability and carbon fixation efficiency of bamboo forests. Based on statistical results produced from fitting the eight basic growth functions using data from 1374 Phyllostachys pubescens in Yixing, Jiangsu Province, China, this study identified the most suitable function (logistic function) to construct a two-level mixed effects (NLME) CW model with the forest block and sample plot-level effects included as random effects in the model. Four methods for selecting sample bamboos per sample plot (largest bamboo, medium-sized bamboo, smallest bamboo, and randomly selected bamboos) and eight sample sizes (1–8 selected bamboos per sample plot) were evaluated to calibrate our NLME CW model. Using diameter at breast height (DBH), height to crown base (HCB), arithmetic mean diameter at breast height (MDBH), and height (H) as predictor variables, the model produced the best fit statistics (Max R(2), min RMSE, and TRE). This model was further improved by introducing random effects at two levels. The results showed a positive correlation of CW with HCB and DBH and a negative correlation with H. The smallest two bamboo poles per sample plot used to estimate the random effects of the NLME model provided a satisfactory compromise regarding measurement cost, model efficiency, and prediction accuracy. The presented NLME CW model may guide effective management and carbon estimation of bamboo forests. Frontiers Media S.A. 2023-02-16 /pmc/articles/PMC9992983/ /pubmed/36909393 http://dx.doi.org/10.3389/fpls.2023.1139448 Text en Copyright © 2023 Zhou, Li, Liu, Sharma, Guan and Fan https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Zhou, Xiao Li, Zhen Liu, Liyang Sharma, Ram P. Guan, Fengying Fan, Shaohui Constructing two-level nonlinear mixed-effects crown width models for Moso bamboo in China |
title | Constructing two-level nonlinear mixed-effects crown width models for Moso bamboo in China |
title_full | Constructing two-level nonlinear mixed-effects crown width models for Moso bamboo in China |
title_fullStr | Constructing two-level nonlinear mixed-effects crown width models for Moso bamboo in China |
title_full_unstemmed | Constructing two-level nonlinear mixed-effects crown width models for Moso bamboo in China |
title_short | Constructing two-level nonlinear mixed-effects crown width models for Moso bamboo in China |
title_sort | constructing two-level nonlinear mixed-effects crown width models for moso bamboo in china |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9992983/ https://www.ncbi.nlm.nih.gov/pubmed/36909393 http://dx.doi.org/10.3389/fpls.2023.1139448 |
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