Cargando…
Ecological distribution and genetic diversity of Azolla in Uganda
BACKGROUND: Azolla is an important aquatic fern whose agronomic potential has not been fully exploited in Uganda. This study aimed at determining the genetic variation in the Azolla species existing in Uganda and the factors influencing their distribution in the different agro-ecological zones of Ug...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9993591/ https://www.ncbi.nlm.nih.gov/pubmed/36882684 http://dx.doi.org/10.1186/s12870-023-04146-6 |
_version_ | 1784902544785408000 |
---|---|
author | Lydia, Nabyonga Basamba, Twaha A. Nyakoojo, Clement Mustafa, Abubakar Sadik Saidi, Ntambi Mutumba, Gerald M. Ssenku, Jamilu E. |
author_facet | Lydia, Nabyonga Basamba, Twaha A. Nyakoojo, Clement Mustafa, Abubakar Sadik Saidi, Ntambi Mutumba, Gerald M. Ssenku, Jamilu E. |
author_sort | Lydia, Nabyonga |
collection | PubMed |
description | BACKGROUND: Azolla is an important aquatic fern whose agronomic potential has not been fully exploited in Uganda. This study aimed at determining the genetic variation in the Azolla species existing in Uganda and the factors influencing their distribution in the different agro-ecological zones of Uganda. Molecular characterization was preferred in this study because of its efficiency in detecting variations among closely related species. RESULTS: Four species of Azolla were identified in Uganda with 100, 93.36, 99.22 and 99.39% sequence identities to the reference database sequences of; Azolla mexicana, Azolla microphylla, Azolla filiculoides and Azolla cristata, respectively. These different species were distributed in four out of the ten agro-ecological zones of Uganda which are situated in close vicinity to large water masses. The principal component analysis (PCA) results revealed that maximum rainfall and altitude significantly accounted for the variations in the distribution of Azolla with factor loadings of 0.921 and 0.922, respectively. CONCLUSION: Massive destruction coupled with prolonged disturbance of Azolla’s habitat negatively affected its growth, survival and distribution in the country. Therefore, there is a need to develop standard methods that can preserve the various species of Azolla, so as to salvage them for future use, research and reference. |
format | Online Article Text |
id | pubmed-9993591 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-99935912023-03-09 Ecological distribution and genetic diversity of Azolla in Uganda Lydia, Nabyonga Basamba, Twaha A. Nyakoojo, Clement Mustafa, Abubakar Sadik Saidi, Ntambi Mutumba, Gerald M. Ssenku, Jamilu E. BMC Plant Biol Research BACKGROUND: Azolla is an important aquatic fern whose agronomic potential has not been fully exploited in Uganda. This study aimed at determining the genetic variation in the Azolla species existing in Uganda and the factors influencing their distribution in the different agro-ecological zones of Uganda. Molecular characterization was preferred in this study because of its efficiency in detecting variations among closely related species. RESULTS: Four species of Azolla were identified in Uganda with 100, 93.36, 99.22 and 99.39% sequence identities to the reference database sequences of; Azolla mexicana, Azolla microphylla, Azolla filiculoides and Azolla cristata, respectively. These different species were distributed in four out of the ten agro-ecological zones of Uganda which are situated in close vicinity to large water masses. The principal component analysis (PCA) results revealed that maximum rainfall and altitude significantly accounted for the variations in the distribution of Azolla with factor loadings of 0.921 and 0.922, respectively. CONCLUSION: Massive destruction coupled with prolonged disturbance of Azolla’s habitat negatively affected its growth, survival and distribution in the country. Therefore, there is a need to develop standard methods that can preserve the various species of Azolla, so as to salvage them for future use, research and reference. BioMed Central 2023-03-08 /pmc/articles/PMC9993591/ /pubmed/36882684 http://dx.doi.org/10.1186/s12870-023-04146-6 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Lydia, Nabyonga Basamba, Twaha A. Nyakoojo, Clement Mustafa, Abubakar Sadik Saidi, Ntambi Mutumba, Gerald M. Ssenku, Jamilu E. Ecological distribution and genetic diversity of Azolla in Uganda |
title | Ecological distribution and genetic diversity of Azolla in Uganda |
title_full | Ecological distribution and genetic diversity of Azolla in Uganda |
title_fullStr | Ecological distribution and genetic diversity of Azolla in Uganda |
title_full_unstemmed | Ecological distribution and genetic diversity of Azolla in Uganda |
title_short | Ecological distribution and genetic diversity of Azolla in Uganda |
title_sort | ecological distribution and genetic diversity of azolla in uganda |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9993591/ https://www.ncbi.nlm.nih.gov/pubmed/36882684 http://dx.doi.org/10.1186/s12870-023-04146-6 |
work_keys_str_mv | AT lydianabyonga ecologicaldistributionandgeneticdiversityofazollainuganda AT basambatwahaa ecologicaldistributionandgeneticdiversityofazollainuganda AT nyakoojoclement ecologicaldistributionandgeneticdiversityofazollainuganda AT mustafaabubakarsadik ecologicaldistributionandgeneticdiversityofazollainuganda AT saidintambi ecologicaldistributionandgeneticdiversityofazollainuganda AT mutumbageraldm ecologicaldistributionandgeneticdiversityofazollainuganda AT ssenkujamilue ecologicaldistributionandgeneticdiversityofazollainuganda |