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Preparing pathological data to develop an artificial intelligence model in the nonclinical study

Artificial intelligence (AI)-based analysis has recently been adopted in the examination of histological slides via the digitization of glass slides using a digital scanner. In this study, we examined the effect of varying the staining color tone and magnification level of a dataset on the result of...

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Autores principales: Hwang, Ji-Hee, Lim, Minyoung, Han, Gyeongjin, Park, Heejin, Kim, Yong-Bum, Park, Jinseok, Jun, Sang-Yeop, Lee, Jaeku, Cho, Jae-Woo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9994413/
https://www.ncbi.nlm.nih.gov/pubmed/36890209
http://dx.doi.org/10.1038/s41598-023-30944-x
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author Hwang, Ji-Hee
Lim, Minyoung
Han, Gyeongjin
Park, Heejin
Kim, Yong-Bum
Park, Jinseok
Jun, Sang-Yeop
Lee, Jaeku
Cho, Jae-Woo
author_facet Hwang, Ji-Hee
Lim, Minyoung
Han, Gyeongjin
Park, Heejin
Kim, Yong-Bum
Park, Jinseok
Jun, Sang-Yeop
Lee, Jaeku
Cho, Jae-Woo
author_sort Hwang, Ji-Hee
collection PubMed
description Artificial intelligence (AI)-based analysis has recently been adopted in the examination of histological slides via the digitization of glass slides using a digital scanner. In this study, we examined the effect of varying the staining color tone and magnification level of a dataset on the result of AI model prediction in hematoxylin and eosin stained whole slide images (WSIs). The WSIs of liver tissues with fibrosis were used as an example, and three different datasets (N20, B20, and B10) were prepared with different color tones and magnifications. Using these datasets, we built five models trained Mask R-CNN algorithm by a single or mixed dataset of N20, B20, and B10. We evaluated their model performance using the test dataset of three datasets. It was found that the models that were trained with mixed datasets (models B20/N20 and B10/B20), which consist of different color tones or magnifications, performed better than the single dataset trained models. Consequently, superior performance of the mixed models was obtained from the actual prediction results of the test images. We suggest that training the algorithm with various staining color tones and multi-scaled image datasets would be more optimized for consistent remarkable performance in predicting pathological lesions of interest.
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spelling pubmed-99944132023-03-09 Preparing pathological data to develop an artificial intelligence model in the nonclinical study Hwang, Ji-Hee Lim, Minyoung Han, Gyeongjin Park, Heejin Kim, Yong-Bum Park, Jinseok Jun, Sang-Yeop Lee, Jaeku Cho, Jae-Woo Sci Rep Article Artificial intelligence (AI)-based analysis has recently been adopted in the examination of histological slides via the digitization of glass slides using a digital scanner. In this study, we examined the effect of varying the staining color tone and magnification level of a dataset on the result of AI model prediction in hematoxylin and eosin stained whole slide images (WSIs). The WSIs of liver tissues with fibrosis were used as an example, and three different datasets (N20, B20, and B10) were prepared with different color tones and magnifications. Using these datasets, we built five models trained Mask R-CNN algorithm by a single or mixed dataset of N20, B20, and B10. We evaluated their model performance using the test dataset of three datasets. It was found that the models that were trained with mixed datasets (models B20/N20 and B10/B20), which consist of different color tones or magnifications, performed better than the single dataset trained models. Consequently, superior performance of the mixed models was obtained from the actual prediction results of the test images. We suggest that training the algorithm with various staining color tones and multi-scaled image datasets would be more optimized for consistent remarkable performance in predicting pathological lesions of interest. Nature Publishing Group UK 2023-03-08 /pmc/articles/PMC9994413/ /pubmed/36890209 http://dx.doi.org/10.1038/s41598-023-30944-x Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Hwang, Ji-Hee
Lim, Minyoung
Han, Gyeongjin
Park, Heejin
Kim, Yong-Bum
Park, Jinseok
Jun, Sang-Yeop
Lee, Jaeku
Cho, Jae-Woo
Preparing pathological data to develop an artificial intelligence model in the nonclinical study
title Preparing pathological data to develop an artificial intelligence model in the nonclinical study
title_full Preparing pathological data to develop an artificial intelligence model in the nonclinical study
title_fullStr Preparing pathological data to develop an artificial intelligence model in the nonclinical study
title_full_unstemmed Preparing pathological data to develop an artificial intelligence model in the nonclinical study
title_short Preparing pathological data to develop an artificial intelligence model in the nonclinical study
title_sort preparing pathological data to develop an artificial intelligence model in the nonclinical study
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9994413/
https://www.ncbi.nlm.nih.gov/pubmed/36890209
http://dx.doi.org/10.1038/s41598-023-30944-x
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