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A workflow for viewing biomedical computational fluid dynamics results and corresponding data within virtual and augmented reality environments

Researchers conducting computational fluid dynamics (CFD) modeling can spend weeks obtaining imaging data, determining boundary conditions, running simulations and post-processing files. However, results are typically viewed on a 2D display and often at one point in time thus reducing the dynamic an...

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Autores principales: Venn, John, Larkee, Christopher E., Garcia, Guilherme J. M., Rayz, Vitaliy L., LaDisa, John F.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9996009/
https://www.ncbi.nlm.nih.gov/pubmed/36908292
http://dx.doi.org/10.3389/fmedt.2023.1096289
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author Venn, John
Larkee, Christopher E.
Garcia, Guilherme J. M.
Rayz, Vitaliy L.
LaDisa, John F.
author_facet Venn, John
Larkee, Christopher E.
Garcia, Guilherme J. M.
Rayz, Vitaliy L.
LaDisa, John F.
author_sort Venn, John
collection PubMed
description Researchers conducting computational fluid dynamics (CFD) modeling can spend weeks obtaining imaging data, determining boundary conditions, running simulations and post-processing files. However, results are typically viewed on a 2D display and often at one point in time thus reducing the dynamic and inherently three-dimensional data to a static image. Results from different pathologic states or cases are rarely compared in real-time, and supplementary data are seldom included. Therefore, only a fraction of CFD results are typically studied in detail, and associations between mechanical stimuli and biological response may be overlooked. Virtual and augmented reality facilitate stereoscopic viewing that may foster extraction of more information from CFD results by taking advantage of improved depth cues, as well as custom content development and interactivity, all within an immersive approach. Our objective was to develop a straightforward, semi-automated workflow for enhanced viewing of CFD results and associated data in an immersive virtual environment (IVE). The workflow supports common CFD software and has been successfully completed by novice users in about an hour, demonstrating its ease of use. Moreover, its utility is demonstrated across clinical research areas and IVE platforms spanning a range of cost and development considerations. We are optimistic that this advancement, which decreases and simplifies the steps to facilitate more widespread use of immersive CFD viewing, will foster more efficient collaboration between engineers and clinicians. Initial clinical feedback is presented, and instructional videos, manuals, templates and sample data are provided online to facilitate adoption by the community.
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spelling pubmed-99960092023-03-10 A workflow for viewing biomedical computational fluid dynamics results and corresponding data within virtual and augmented reality environments Venn, John Larkee, Christopher E. Garcia, Guilherme J. M. Rayz, Vitaliy L. LaDisa, John F. Front Med Technol Medical Technology Researchers conducting computational fluid dynamics (CFD) modeling can spend weeks obtaining imaging data, determining boundary conditions, running simulations and post-processing files. However, results are typically viewed on a 2D display and often at one point in time thus reducing the dynamic and inherently three-dimensional data to a static image. Results from different pathologic states or cases are rarely compared in real-time, and supplementary data are seldom included. Therefore, only a fraction of CFD results are typically studied in detail, and associations between mechanical stimuli and biological response may be overlooked. Virtual and augmented reality facilitate stereoscopic viewing that may foster extraction of more information from CFD results by taking advantage of improved depth cues, as well as custom content development and interactivity, all within an immersive approach. Our objective was to develop a straightforward, semi-automated workflow for enhanced viewing of CFD results and associated data in an immersive virtual environment (IVE). The workflow supports common CFD software and has been successfully completed by novice users in about an hour, demonstrating its ease of use. Moreover, its utility is demonstrated across clinical research areas and IVE platforms spanning a range of cost and development considerations. We are optimistic that this advancement, which decreases and simplifies the steps to facilitate more widespread use of immersive CFD viewing, will foster more efficient collaboration between engineers and clinicians. Initial clinical feedback is presented, and instructional videos, manuals, templates and sample data are provided online to facilitate adoption by the community. Frontiers Media S.A. 2023-02-23 /pmc/articles/PMC9996009/ /pubmed/36908292 http://dx.doi.org/10.3389/fmedt.2023.1096289 Text en © 2023 Venn, Larkee, Garcia, Rayz and LaDisa. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY) (https://creativecommons.org/licenses/by/4.0/) . The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Medical Technology
Venn, John
Larkee, Christopher E.
Garcia, Guilherme J. M.
Rayz, Vitaliy L.
LaDisa, John F.
A workflow for viewing biomedical computational fluid dynamics results and corresponding data within virtual and augmented reality environments
title A workflow for viewing biomedical computational fluid dynamics results and corresponding data within virtual and augmented reality environments
title_full A workflow for viewing biomedical computational fluid dynamics results and corresponding data within virtual and augmented reality environments
title_fullStr A workflow for viewing biomedical computational fluid dynamics results and corresponding data within virtual and augmented reality environments
title_full_unstemmed A workflow for viewing biomedical computational fluid dynamics results and corresponding data within virtual and augmented reality environments
title_short A workflow for viewing biomedical computational fluid dynamics results and corresponding data within virtual and augmented reality environments
title_sort workflow for viewing biomedical computational fluid dynamics results and corresponding data within virtual and augmented reality environments
topic Medical Technology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9996009/
https://www.ncbi.nlm.nih.gov/pubmed/36908292
http://dx.doi.org/10.3389/fmedt.2023.1096289
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