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Integration of transcriptome and metabolome analyses reveals sorghum roots responding to cadmium stress through regulation of the flavonoid biosynthesis pathway
Cadmium (Cd) pollution is a serious threat to plant growth and human health. Although the mechanisms controlling the Cd response have been elucidated in other species, they remain unknown in Sorghum (Sorghum bicolor (L.) Moench), an important C(4) cereal crop. Here, one-week-old sorghum seedlings we...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9996021/ https://www.ncbi.nlm.nih.gov/pubmed/36909379 http://dx.doi.org/10.3389/fpls.2023.1144265 |
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author | Jiao, Zhiyin Shi, Yannan Wang, Jinping Wang, Zhifang Zhang, Xing Jia, Xinyue Du, Qi Niu, Jingtian Liu, Bocheng Du, Ruiheng Ji, Guisu Cao, Junfeng Lv, Peng |
author_facet | Jiao, Zhiyin Shi, Yannan Wang, Jinping Wang, Zhifang Zhang, Xing Jia, Xinyue Du, Qi Niu, Jingtian Liu, Bocheng Du, Ruiheng Ji, Guisu Cao, Junfeng Lv, Peng |
author_sort | Jiao, Zhiyin |
collection | PubMed |
description | Cadmium (Cd) pollution is a serious threat to plant growth and human health. Although the mechanisms controlling the Cd response have been elucidated in other species, they remain unknown in Sorghum (Sorghum bicolor (L.) Moench), an important C(4) cereal crop. Here, one-week-old sorghum seedlings were exposed to different concentrations (0, 10, 20, 50, 100, and 150 μM) of CdCl(2) and the effects of these different concentrations on morphological responses were evaluated. Cd stress significantly decreased the activities of the enzymes peroxidase (POD), superoxide dismutase (SOD), glutathione S-transferase (GST) and catalase (CAT), and increased malondialdehyde (MDA) levels, leading to inhibition of plant height, decreases in lateral root density and plant biomass production. Based on these results, 10 μM Cd concentration was chosen for further transcription and metabolic analyses. A total of 2683 genes and 160 metabolites were found to have significant differential abundances between the control and Cd-treated groups. Multi-omics integrative analysis revealed that the flavonoid biosynthesis pathway plays a critical role in regulating Cd stress responses in sorghum. These results provide new insights into the mechanism underlying the response of sorghum to Cd. |
format | Online Article Text |
id | pubmed-9996021 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-99960212023-03-10 Integration of transcriptome and metabolome analyses reveals sorghum roots responding to cadmium stress through regulation of the flavonoid biosynthesis pathway Jiao, Zhiyin Shi, Yannan Wang, Jinping Wang, Zhifang Zhang, Xing Jia, Xinyue Du, Qi Niu, Jingtian Liu, Bocheng Du, Ruiheng Ji, Guisu Cao, Junfeng Lv, Peng Front Plant Sci Plant Science Cadmium (Cd) pollution is a serious threat to plant growth and human health. Although the mechanisms controlling the Cd response have been elucidated in other species, they remain unknown in Sorghum (Sorghum bicolor (L.) Moench), an important C(4) cereal crop. Here, one-week-old sorghum seedlings were exposed to different concentrations (0, 10, 20, 50, 100, and 150 μM) of CdCl(2) and the effects of these different concentrations on morphological responses were evaluated. Cd stress significantly decreased the activities of the enzymes peroxidase (POD), superoxide dismutase (SOD), glutathione S-transferase (GST) and catalase (CAT), and increased malondialdehyde (MDA) levels, leading to inhibition of plant height, decreases in lateral root density and plant biomass production. Based on these results, 10 μM Cd concentration was chosen for further transcription and metabolic analyses. A total of 2683 genes and 160 metabolites were found to have significant differential abundances between the control and Cd-treated groups. Multi-omics integrative analysis revealed that the flavonoid biosynthesis pathway plays a critical role in regulating Cd stress responses in sorghum. These results provide new insights into the mechanism underlying the response of sorghum to Cd. Frontiers Media S.A. 2023-02-23 /pmc/articles/PMC9996021/ /pubmed/36909379 http://dx.doi.org/10.3389/fpls.2023.1144265 Text en Copyright © 2023 Jiao, Shi, Wang, Wang, Zhang, Jia, Du, Niu, Liu, Du, Ji, Cao and Lv https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Jiao, Zhiyin Shi, Yannan Wang, Jinping Wang, Zhifang Zhang, Xing Jia, Xinyue Du, Qi Niu, Jingtian Liu, Bocheng Du, Ruiheng Ji, Guisu Cao, Junfeng Lv, Peng Integration of transcriptome and metabolome analyses reveals sorghum roots responding to cadmium stress through regulation of the flavonoid biosynthesis pathway |
title | Integration of transcriptome and metabolome analyses reveals sorghum roots responding to cadmium stress through regulation of the flavonoid biosynthesis pathway |
title_full | Integration of transcriptome and metabolome analyses reveals sorghum roots responding to cadmium stress through regulation of the flavonoid biosynthesis pathway |
title_fullStr | Integration of transcriptome and metabolome analyses reveals sorghum roots responding to cadmium stress through regulation of the flavonoid biosynthesis pathway |
title_full_unstemmed | Integration of transcriptome and metabolome analyses reveals sorghum roots responding to cadmium stress through regulation of the flavonoid biosynthesis pathway |
title_short | Integration of transcriptome and metabolome analyses reveals sorghum roots responding to cadmium stress through regulation of the flavonoid biosynthesis pathway |
title_sort | integration of transcriptome and metabolome analyses reveals sorghum roots responding to cadmium stress through regulation of the flavonoid biosynthesis pathway |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9996021/ https://www.ncbi.nlm.nih.gov/pubmed/36909379 http://dx.doi.org/10.3389/fpls.2023.1144265 |
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