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Towards reproducible research in recurrent pregnancy loss immunology: Learning from cancer microenvironment deconvolution

The most recent international guidelines regarding recurrent pregnancy loss (RPL) exclude most of the immunological tests recommended for RPL since they do not reach an evidence-based level. Comparisons for metanalysis and systematic reviews are limited by the ambiguity in terms of RPL definition, e...

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Autores principales: Betti, Martina, Vizza, Enrico, Piccione, Emilio, Pietropolli, Adalgisa, Chiofalo, Benito, Pallocca, Matteo, Bruno, Valentina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9996132/
https://www.ncbi.nlm.nih.gov/pubmed/36911667
http://dx.doi.org/10.3389/fimmu.2023.1082087
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author Betti, Martina
Vizza, Enrico
Piccione, Emilio
Pietropolli, Adalgisa
Chiofalo, Benito
Pallocca, Matteo
Bruno, Valentina
author_facet Betti, Martina
Vizza, Enrico
Piccione, Emilio
Pietropolli, Adalgisa
Chiofalo, Benito
Pallocca, Matteo
Bruno, Valentina
author_sort Betti, Martina
collection PubMed
description The most recent international guidelines regarding recurrent pregnancy loss (RPL) exclude most of the immunological tests recommended for RPL since they do not reach an evidence-based level. Comparisons for metanalysis and systematic reviews are limited by the ambiguity in terms of RPL definition, etiological and risk factors, diagnostic work-up, and treatments applied. Therefore, cohort heterogeneity, the inadequacy of numerosity, and the quality of data confirm a not standardized research quality in the RPL field, especially for immunological background, for which potential research application remains confined in a separate single biological layer. Innovative sequencing technologies and databases have proved to play a significant role in the exploration and validation of cancer research in the context of dataset quality and bioinformatics tools. In this article, we will investigate how bioinformatics tools born for large-scale cancer immunological research could revolutionize RPL immunological research but are limited by the nature of current RPL datasets.
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spelling pubmed-99961322023-03-10 Towards reproducible research in recurrent pregnancy loss immunology: Learning from cancer microenvironment deconvolution Betti, Martina Vizza, Enrico Piccione, Emilio Pietropolli, Adalgisa Chiofalo, Benito Pallocca, Matteo Bruno, Valentina Front Immunol Immunology The most recent international guidelines regarding recurrent pregnancy loss (RPL) exclude most of the immunological tests recommended for RPL since they do not reach an evidence-based level. Comparisons for metanalysis and systematic reviews are limited by the ambiguity in terms of RPL definition, etiological and risk factors, diagnostic work-up, and treatments applied. Therefore, cohort heterogeneity, the inadequacy of numerosity, and the quality of data confirm a not standardized research quality in the RPL field, especially for immunological background, for which potential research application remains confined in a separate single biological layer. Innovative sequencing technologies and databases have proved to play a significant role in the exploration and validation of cancer research in the context of dataset quality and bioinformatics tools. In this article, we will investigate how bioinformatics tools born for large-scale cancer immunological research could revolutionize RPL immunological research but are limited by the nature of current RPL datasets. Frontiers Media S.A. 2023-02-23 /pmc/articles/PMC9996132/ /pubmed/36911667 http://dx.doi.org/10.3389/fimmu.2023.1082087 Text en Copyright © 2023 Betti, Vizza, Piccione, Pietropolli, Chiofalo, Pallocca and Bruno https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Immunology
Betti, Martina
Vizza, Enrico
Piccione, Emilio
Pietropolli, Adalgisa
Chiofalo, Benito
Pallocca, Matteo
Bruno, Valentina
Towards reproducible research in recurrent pregnancy loss immunology: Learning from cancer microenvironment deconvolution
title Towards reproducible research in recurrent pregnancy loss immunology: Learning from cancer microenvironment deconvolution
title_full Towards reproducible research in recurrent pregnancy loss immunology: Learning from cancer microenvironment deconvolution
title_fullStr Towards reproducible research in recurrent pregnancy loss immunology: Learning from cancer microenvironment deconvolution
title_full_unstemmed Towards reproducible research in recurrent pregnancy loss immunology: Learning from cancer microenvironment deconvolution
title_short Towards reproducible research in recurrent pregnancy loss immunology: Learning from cancer microenvironment deconvolution
title_sort towards reproducible research in recurrent pregnancy loss immunology: learning from cancer microenvironment deconvolution
topic Immunology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9996132/
https://www.ncbi.nlm.nih.gov/pubmed/36911667
http://dx.doi.org/10.3389/fimmu.2023.1082087
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