Cargando…

IMPPAT 2.0: An Enhanced and Expanded Phytochemical Atlas of Indian Medicinal Plants

[Image: see text] Compilation, curation, digitization, and exploration of the phytochemical space of Indian medicinal plants can expedite ongoing efforts toward natural product and traditional knowledge based drug discovery. To this end, we present IMPPAT 2.0, an enhanced and expanded database compi...

Descripción completa

Detalles Bibliográficos
Autores principales: Vivek-Ananth, R.P., Mohanraj, Karthikeyan, Sahoo, Ajaya Kumar, Samal, Areejit
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9996785/
https://www.ncbi.nlm.nih.gov/pubmed/36910986
http://dx.doi.org/10.1021/acsomega.3c00156
_version_ 1784903121287249920
author Vivek-Ananth, R.P.
Mohanraj, Karthikeyan
Sahoo, Ajaya Kumar
Samal, Areejit
author_facet Vivek-Ananth, R.P.
Mohanraj, Karthikeyan
Sahoo, Ajaya Kumar
Samal, Areejit
author_sort Vivek-Ananth, R.P.
collection PubMed
description [Image: see text] Compilation, curation, digitization, and exploration of the phytochemical space of Indian medicinal plants can expedite ongoing efforts toward natural product and traditional knowledge based drug discovery. To this end, we present IMPPAT 2.0, an enhanced and expanded database compiling manually curated information on 4010 Indian medicinal plants, 17,967 phytochemicals, and 1095 therapeutic uses. Notably, IMPPAT 2.0 compiles associations at the level of plant parts and provides a FAIR-compliant nonredundant in silico stereo-aware library of 17,967 phytochemicals from Indian medicinal plants. The phytochemical library has been annotated with several useful properties to enable easier exploration of the chemical space. We have also filtered a subset of 1335 drug-like phytochemicals of which majority have no similarity to existing approved drugs. Using cheminformatics, we have characterized the molecular complexity and molecular scaffold based structural diversity of the phytochemical space of Indian medicinal plants and performed a comparative analysis with other chemical libraries. Altogether, IMPPAT 2.0 is a manually curated extensive phytochemical atlas of Indian medicinal plants that is accessible at https://cb.imsc.res.in/imppat/.
format Online
Article
Text
id pubmed-9996785
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher American Chemical Society
record_format MEDLINE/PubMed
spelling pubmed-99967852023-03-10 IMPPAT 2.0: An Enhanced and Expanded Phytochemical Atlas of Indian Medicinal Plants Vivek-Ananth, R.P. Mohanraj, Karthikeyan Sahoo, Ajaya Kumar Samal, Areejit ACS Omega [Image: see text] Compilation, curation, digitization, and exploration of the phytochemical space of Indian medicinal plants can expedite ongoing efforts toward natural product and traditional knowledge based drug discovery. To this end, we present IMPPAT 2.0, an enhanced and expanded database compiling manually curated information on 4010 Indian medicinal plants, 17,967 phytochemicals, and 1095 therapeutic uses. Notably, IMPPAT 2.0 compiles associations at the level of plant parts and provides a FAIR-compliant nonredundant in silico stereo-aware library of 17,967 phytochemicals from Indian medicinal plants. The phytochemical library has been annotated with several useful properties to enable easier exploration of the chemical space. We have also filtered a subset of 1335 drug-like phytochemicals of which majority have no similarity to existing approved drugs. Using cheminformatics, we have characterized the molecular complexity and molecular scaffold based structural diversity of the phytochemical space of Indian medicinal plants and performed a comparative analysis with other chemical libraries. Altogether, IMPPAT 2.0 is a manually curated extensive phytochemical atlas of Indian medicinal plants that is accessible at https://cb.imsc.res.in/imppat/. American Chemical Society 2023-02-23 /pmc/articles/PMC9996785/ /pubmed/36910986 http://dx.doi.org/10.1021/acsomega.3c00156 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Vivek-Ananth, R.P.
Mohanraj, Karthikeyan
Sahoo, Ajaya Kumar
Samal, Areejit
IMPPAT 2.0: An Enhanced and Expanded Phytochemical Atlas of Indian Medicinal Plants
title IMPPAT 2.0: An Enhanced and Expanded Phytochemical Atlas of Indian Medicinal Plants
title_full IMPPAT 2.0: An Enhanced and Expanded Phytochemical Atlas of Indian Medicinal Plants
title_fullStr IMPPAT 2.0: An Enhanced and Expanded Phytochemical Atlas of Indian Medicinal Plants
title_full_unstemmed IMPPAT 2.0: An Enhanced and Expanded Phytochemical Atlas of Indian Medicinal Plants
title_short IMPPAT 2.0: An Enhanced and Expanded Phytochemical Atlas of Indian Medicinal Plants
title_sort imppat 2.0: an enhanced and expanded phytochemical atlas of indian medicinal plants
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9996785/
https://www.ncbi.nlm.nih.gov/pubmed/36910986
http://dx.doi.org/10.1021/acsomega.3c00156
work_keys_str_mv AT vivekananthrp imppat20anenhancedandexpandedphytochemicalatlasofindianmedicinalplants
AT mohanrajkarthikeyan imppat20anenhancedandexpandedphytochemicalatlasofindianmedicinalplants
AT sahooajayakumar imppat20anenhancedandexpandedphytochemicalatlasofindianmedicinalplants
AT samalareejit imppat20anenhancedandexpandedphytochemicalatlasofindianmedicinalplants