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Deuterium isotope probing (DIP) on Listeria innocua: Optimisation of labelling and impact on viability state

An innovative approach, Raman microspectroscopy coupled with deuterium isotope probing (Raman-DIP), can be used to evaluate the metabolism of deuterated carbon source in bacteria and also to presume different anabolic pathways. This method requires the treatment of cells with heavy water that could...

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Autores principales: Trigueros, Sylvain, Brauge, Thomas, Dedole, Tommy, Debuiche, Sabine, Rebuffel, Véronique, Morales, Sophie, Marcoux, Pierre R., Midelet, Graziella
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9997870/
https://www.ncbi.nlm.nih.gov/pubmed/36893178
http://dx.doi.org/10.1371/journal.pone.0280885
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author Trigueros, Sylvain
Brauge, Thomas
Dedole, Tommy
Debuiche, Sabine
Rebuffel, Véronique
Morales, Sophie
Marcoux, Pierre R.
Midelet, Graziella
author_facet Trigueros, Sylvain
Brauge, Thomas
Dedole, Tommy
Debuiche, Sabine
Rebuffel, Véronique
Morales, Sophie
Marcoux, Pierre R.
Midelet, Graziella
author_sort Trigueros, Sylvain
collection PubMed
description An innovative approach, Raman microspectroscopy coupled with deuterium isotope probing (Raman-DIP), can be used to evaluate the metabolism of deuterated carbon source in bacteria and also to presume different anabolic pathways. This method requires the treatment of cells with heavy water that could affect the bacterial viability state at higher concentration. In this study, we evaluated the effect of heavy water incorporation on the viability state of Listeria innocua cells. We exposed the L. innocua suspensions to different heavy water concentrations (0%, 25%, 50% and 75%) from 30 minutes to 72 h of incubation times at 37°C. The total, viable and viable culturable populations were quantified by qPCR, PMA-qPCR and plate count agar respectively. We analyzed heavy water incorporation by Raman-DIP. The exposure of L. innocua cells to different concentrations of heavy water did not alter their cell viability to 24 h incubation time. In addition, the maximum intensity for C-D band, specific for the incorporation of heavy water, was reached after 2 h of exposure in a media containing 75% v/v D(2)O but an early detection of the labelling was possible at t = 1 h 30 min. In conclusion, the use of D(2)O as a metabolic marker was validated and can be developed for the detection of L. innocua cell viability state.
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spelling pubmed-99978702023-03-10 Deuterium isotope probing (DIP) on Listeria innocua: Optimisation of labelling and impact on viability state Trigueros, Sylvain Brauge, Thomas Dedole, Tommy Debuiche, Sabine Rebuffel, Véronique Morales, Sophie Marcoux, Pierre R. Midelet, Graziella PLoS One Research Article An innovative approach, Raman microspectroscopy coupled with deuterium isotope probing (Raman-DIP), can be used to evaluate the metabolism of deuterated carbon source in bacteria and also to presume different anabolic pathways. This method requires the treatment of cells with heavy water that could affect the bacterial viability state at higher concentration. In this study, we evaluated the effect of heavy water incorporation on the viability state of Listeria innocua cells. We exposed the L. innocua suspensions to different heavy water concentrations (0%, 25%, 50% and 75%) from 30 minutes to 72 h of incubation times at 37°C. The total, viable and viable culturable populations were quantified by qPCR, PMA-qPCR and plate count agar respectively. We analyzed heavy water incorporation by Raman-DIP. The exposure of L. innocua cells to different concentrations of heavy water did not alter their cell viability to 24 h incubation time. In addition, the maximum intensity for C-D band, specific for the incorporation of heavy water, was reached after 2 h of exposure in a media containing 75% v/v D(2)O but an early detection of the labelling was possible at t = 1 h 30 min. In conclusion, the use of D(2)O as a metabolic marker was validated and can be developed for the detection of L. innocua cell viability state. Public Library of Science 2023-03-09 /pmc/articles/PMC9997870/ /pubmed/36893178 http://dx.doi.org/10.1371/journal.pone.0280885 Text en © 2023 Trigueros et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Trigueros, Sylvain
Brauge, Thomas
Dedole, Tommy
Debuiche, Sabine
Rebuffel, Véronique
Morales, Sophie
Marcoux, Pierre R.
Midelet, Graziella
Deuterium isotope probing (DIP) on Listeria innocua: Optimisation of labelling and impact on viability state
title Deuterium isotope probing (DIP) on Listeria innocua: Optimisation of labelling and impact on viability state
title_full Deuterium isotope probing (DIP) on Listeria innocua: Optimisation of labelling and impact on viability state
title_fullStr Deuterium isotope probing (DIP) on Listeria innocua: Optimisation of labelling and impact on viability state
title_full_unstemmed Deuterium isotope probing (DIP) on Listeria innocua: Optimisation of labelling and impact on viability state
title_short Deuterium isotope probing (DIP) on Listeria innocua: Optimisation of labelling and impact on viability state
title_sort deuterium isotope probing (dip) on listeria innocua: optimisation of labelling and impact on viability state
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9997870/
https://www.ncbi.nlm.nih.gov/pubmed/36893178
http://dx.doi.org/10.1371/journal.pone.0280885
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