Cargando…

Editorial: Methods in genome, pan-genome, pan-transcriptome, and gene regulatory network (GRN) construction and analysis

Detalles Bibliográficos
Autores principales:	Gupta, Parul, Li, Song
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Frontiers Media S.A. 2023
Materias:	Plant Science
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9998991/ https://www.ncbi.nlm.nih.gov/pubmed/36909378 http://dx.doi.org/10.3389/fpls.2023.1152708

Ejemplares similares

Sorghum Pan-Genome Explores the Functional Utility for Genomic-Assisted Breeding to Accelerate the Genetic Gain
por: Ruperao, Pradeep, et al.
Publicado: (2021)

Pan-genome analysis of three main Chinese chestnut varieties
por: Hu, Guanglong, et al.
Publicado: (2022)

Analysis of Plant Pan-Genomes and Transcriptomes with GET_HOMOLOGUES-EST, a Clustering Solution for Sequences of the Same Species
por: Contreras-Moreira, Bruno, et al.
Publicado: (2017)

PanGraph: scalable bacterial pan-genome graph construction
por: Noll, Nicholas, et al.
Publicado: (2023)

Terpene Synthases in Rice Pan-Genome and Their Responses to Chilo suppressalis Larvae Infesting
por: Sun, Yang, et al.
Publicado: (2022)

Genome and pan-genome assembly of asparagus bean (Vigna unguiculata ssp. sesquipedialis) reveal the genetic basis of cold adaptation
por: Liang, Le, et al.
Publicado: (2022)

D3GRN: a data driven dynamic network construction method to infer gene regulatory networks
por: Chen, Xiang, et al.
Publicado: (2019)

Pan-Genome Analysis Reveals the Abundant Gene Presence/Absence Variations Among Different Varieties of Melon and Their Influence on Traits
por: Sun, Yang, et al.
Publicado: (2022)

Editorial: Construction of regulatory networks in plant abiotic stress responses, volume II
por: Huang, Ji, et al.
Publicado: (2023)

Improving GRN re‐construction by mining hidden regulatory signals
por: Shi, Ming, et al.
Publicado: (2017)

Gene fusions, micro-exons and splice variants define stress signaling by AP2/ERF and WRKY transcription factors in the sesame pan-genome
por: Parakkunnel, Ramya, et al.
Publicado: (2022)

Is the pan-genome also a pan-selectome?
por: Rodriguez-Valera, Francisco, et al.
Publicado: (2012)

Pan-Tetris: an interactive visualisation for Pan-genomes
por: Hennig, André, et al.
Publicado: (2015)

panX: pan-genome analysis and exploration
por: Ding, Wei, et al.
Publicado: (2018)

The Effect of Methodological Considerations on the Construction of Gene-Based Plant Pan-genomes
por: Glick, Lior, et al.
Publicado: (2023)

Construction of Brassica A and C genome-based ordered pan-transcriptomes for use in rapeseed genomic research
por: He, Zhesi, et al.
Publicado: (2015)

Editorial: Evolution of Gene Regulatory Networks in Plant Development
por: Valverde, Federico, et al.
Publicado: (2017)

PanDelos: a dictionary-based method for pan-genome content discovery
por: Bonnici, Vincenzo, et al.
Publicado: (2018)

Co-expression pan-network reveals genes involved in complex traits within maize pan-genome
por: Cagirici, H. Busra, et al.
Publicado: (2022)

The earliest cotton fibers and Pan-regional contacts in the Near East
por: Liu, Li, et al.
Publicado: (2022)

Editorial: Resolving the Complexity of Plant Genomes and Transcriptomes With Long Reads
por: Zmienko, Agnieszka, et al.
Publicado: (2022)

Editorial: Applications of long-read sequencing in plant genomics and transcriptomics
por: Daszkowska-Golec, Agata, et al.
Publicado: (2023)

Regulatory (pan-)genome of an obligate intracellular pathogen in the PVC superphylum
por: de Barsy, Marie, et al.
Publicado: (2016)

Inside the Pan-genome - Methods and Software Overview
por: Guimarães, Luis Carlos, et al.
Publicado: (2015)

PanWeb: A web interface for pan-genomic analysis
por: Pantoja, Yan, et al.
Publicado: (2017)

GRAND: An Integrated Genome, Transcriptome Resources, and Gene Network Database for Gossypium
por: Zhang, Zhibin, et al.
Publicado: (2022)

Editorial: Cooperation of gene regulatory networks and phytohormones in cell development and morphogenesis
por: Asim, Muhammad, et al.
Publicado: (2023)

The pan‐genome of the cultivated soybean (PanSoy) reveals an extraordinarily conserved gene content
por: Torkamaneh, Davoud, et al.
Publicado: (2021)

Evolutionary history and pan-genome dynamics of strawberry (Fragaria spp.)
por: Qiao, Qin, et al.
Publicado: (2021)

Efficient Construction of a Complete Index for Pan-Genomics Read Alignment
por: Kuhnle, Alan, et al.
Publicado: (2020)

Construction of a synthetic Saccharomyces cerevisiae pan-genome neo-chromosome
por: Kutyna, Dariusz R., et al.
Publicado: (2022)

Large-Scale Sequencing of Borreliaceae for the Construction of Pan-Genomic-Based Diagnostics
por: Socarras, Kayla M., et al.
Publicado: (2022)

Editorial: Genomics and gene editing of orphan plants
por: Movahedi, Ali, et al.
Publicado: (2023)

The Salmonella enterica Pan-genome
por: Jacobsen, Annika, et al.
Publicado: (2011)

Editorial: Resolving the complexity of plant genomes and transcriptomes with long reads, volume II
por: Zmienko, Agnieszka, et al.
Publicado: (2023)

Analysis of terpenoids and their gene regulatory networks on the basis of the transcriptome and metabolome of Opisthopappus longilobus
por: Liu, Hua, et al.
Publicado: (2022)

Genome-Wide Analysis of Gene Regulatory Networks of the FVE-HDA6-FLD Complex in Arabidopsis
por: Yu, Chun-Wei, et al.
Publicado: (2016)

LegumeGRN: A Gene Regulatory Network Prediction Server for Functional and Comparative Studies
por: Wang, Mingyi, et al.
Publicado: (2013)

Genomic Characteristics and Pan-Genome Analysis of Rhodococcus equi
por: Song, Yang, et al.
Publicado: (2022)

Single_cell_GRN: gene regulatory network identification based on supervised learning method and Single-cell RNA-seq data
por: Yang, Bin, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_bjsshcv3euepi6hnesfo7v5gcd