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1por Raue, Andreas, Schilling, Marcel, Bachmann, Julie, Matteson, Andrew, Schelke, Max, Kaschek, Daniel, Hug, Sabine, Kreutz, Clemens, Harms, Brian D., Theis, Fabian J., Klingmüller, Ursula, Timmer, Jens“…Due to the high complexity of biological data it is difficult to disentangle cellular processes relying only on intuitive interpretation of measurements. A Systems Biology approach that combines quantitative experimental data with dynamic mathematical modeling promises to yield deeper insights into these processes. …”
Publicado 2013
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2por Maiwald, Thomas, Blumberg, Julie, Raue, Andreas, Hengl, Stefan, Schilling, Marcel, Sy, Sherwin KB, Becker, Verena, Klingmüller, Ursula, Timmer, Jens“…BACKGROUND: Mathematical models of dynamical systems facilitate the computation of characteristic properties that are not accessible experimentally. …”
Publicado 2012
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3“…Furthermore, the combination of dynamic and logical mathematical models with quantitative data allows detailed mechanistic insights into system properties. …”
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4por Pinna, Federico, Sahle, Sven, Beuke, Katharina, Bissinger, Michaela, Tuncay, Selcan, D’Alessandro, Lorenza A., Gauges, Ralph, Raue, Andreas, Timmer, Jens, Klingmüller, Ursula, Schirmacher, Peter, Kummer, Ursula, Breuhahn, KaiEnlace del recurso
Publicado 2012
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5por Sobotta, Svantje, Raue, Andreas, Huang, Xiaoyun, Vanlier, Joep, Jünger, Anja, Bohl, Sebastian, Albrecht, Ute, Hahnel, Maximilian J., Wolf, Stephanie, Mueller, Nikola S., D'Alessandro, Lorenza A., Mueller-Bohl, Stephanie, Boehm, Martin E., Lucarelli, Philippe, Bonefas, Sandra, Damm, Georg, Seehofer, Daniel, Lehmann, Wolf D., Rose-John, Stefan, van der Hoeven, Frank, Gretz, Norbert, Theis, Fabian J., Ehlting, Christian, Bode, Johannes G., Timmer, Jens, Schilling, Marcel, Klingmüller, Ursula“…While different inhibitors of IL-6-induced JAK1-STAT3-signaling have been developed, understanding their precise impact on signaling dynamics requires a systems biology approach. Here we present a mathematical model of IL-6-induced JAK1-STAT3 signaling that quantitatively links physiological IL-6 concentrations to the dynamics of IL-6-induced signal transduction and expression of target genes in hepatocytes. …”
Publicado 2017
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6por Oppelt, Angela, Kaschek, Daniel, Huppelschoten, Suzanna, Sison-Young, Rowena, Zhang, Fang, Buck-Wiese, Marie, Herrmann, Franziska, Malkusch, Sebastian, Krüger, Carmen L., Meub, Mara, Merkt, Benjamin, Zimmermann, Lea, Schofield, Amy, Jones, Robert P., Malik, Hassan, Schilling, Marcel, Heilemann, Mike, van de Water, Bob, Goldring, Christopher E., Park, B. Kevin, Timmer, Jens, Klingmüller, Ursula“…These analyses showed that more than one regulatory module of TNFα-induced NFκB signal transduction is affected by diclofenac, suggesting that hepatotoxicity is the integrated consequence of multiple changes in hepatocytes and that multiple factors define toxicity thresholds. Applying our mathematical modeling approach to other DILI-causing compounds representing different putative DILI mechanism classes enabled us to quantify their impact on pathway activation, highlighting the potential of the dynamic pathway model as a quantitative tool for the analysis of DILI compounds.…”
Publicado 2018
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7por Kallenberger, Stefan M., Unger, Anne L., Legewie, Stefan, Lymperopoulos, Konstantinos, Klingmüller, Ursula, Eils, Roland, Herten, Dirk-Peter“…EpoR trafficking dynamics in adherent H838 lung cancer cells closely resembled the dynamics previously characterized by mathematical modeling in suspension cells, indicating that dynamic properties of the EpoR system are widely conserved. …”
Publicado 2017
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