The YH database: the first Asian diploid genome database

por Li, Guoqing, Ma, Lijia, Song, Chao, Yang, Zhentao, Wang, Xiulan, Huang, Hui, Li, Yingrui, Li, Ruiqiang, Zhang, Xiuqing, Yang, Huanming, Wang, Jian, Wang, Jun
Publicado 2009

The DNA Methylome of Human Peripheral Blood Mononuclear Cells

por Li, Yingrui, Zhu, Jingde, Tian, Geng, Li, Ning, Li, Qibin, Ye, Mingzhi, Zheng, Hancheng, Yu, Jian, Wu, Honglong, Sun, Jihua, Zhang, Hongyu, Chen, Quan, Luo, Ruibang, Chen, Minfeng, He, Yinghua, Jin, Xin, Zhang, Qinghui, Yu, Chang, Zhou, Guangyu, Sun, Jinfeng, Huang, Yebo, Zheng, Huisong, Cao, Hongzhi, Zhou, Xiaoyu, Guo, Shicheng, Hu, Xueda, Li, Xin, Kristiansen, Karsten, Bolund, Lars, Xu, Jiujin, Wang, Wen, Yang, Huanming, Wang, Jian, Li, Ruiqiang, Beck, Stephan, Wang, Jun, Zhang, Xiuqing
Publicado 2010

Mapping copy number variation by population scale genome sequencing

por Mills, Ryan E., Walter, Klaudia, Stewart, Chip, Handsaker, Robert E., Chen, Ken, Alkan, Can, Abyzov, Alexej, Yoon, Seungtai Chris, Ye, Kai, Cheetham, R. Keira, Chinwalla, Asif, Conrad, Donald F., Fu, Yutao, Grubert, Fabian, Hajirasouliha, Iman, Hormozdiari, Fereydoun, Iakoucheva, Lilia M., Iqbal, Zamin, Kang, Shuli, Kidd, Jeffrey M., Konkel, Miriam K., Korn, Joshua, Khurana, Ekta, Kura, Deniz, Lam, Hugo Y. K., Leng, Jing, Li, Ruiqiang, Li, Yingrui, Lin, Chang-Yun, Luo, Ruibang, Mu, Xinmeng Jasmine, Nemesh, James, Peckham, Heather E., Rausch, Tobias, Scally, Aylwyn, Shi, Xinghua, Stromberg, Michael P., Stütz, Adrian M., Urban, Alexander Eckehart, Walker, Jerilyn A., Wu, Jiantao, Zhang, Yujun, Zhang, Zhengdong D., Batzer, Mark A., Ding, Li, Marth, Gobor T., McVean, Gil, Sebat, Jonathan, Snyder, Michael, Wang, Jun, Ye, Kenny, Eichler, Evan E., Gerstein, Mark B., Hurles, Matthew E., Lee, Charles, McCarroll, Steven A., Korbel, Jan O.
Publicado 2011

Exome Sequencing Identifies ZNF644 Mutations in High Myopia

por Shi, Yi, Li, Yingrui, Zhang, Dingding, Zhang, Hao, Li, Yuanfeng, Lu, Fang, Liu, Xiaoqi, He, Fei, Gong, Bo, Cai, Li, Li, Ruiqiang, Liao, Shihuang, Ma, Shi, Lin, He, Cheng, Jing, Zheng, Hancheng, Shan, Ying, Chen, Bin, Hu, Jianbin, Jin, Xin, Zhao, Peiquan, Chen, Yiye, Zhang, Yong, Lin, Ying, Li, Xi, Fan, Yingchuan, Yang, Huanming, Wang, Jun, Yang, Zhenglin
Publicado 2011

Natural Selection Affects Multiple Aspects of Genetic Variation at Putatively Neutral Sites across the Human Genome

por Lohmueller, Kirk E., Albrechtsen, Anders, Li, Yingrui, Kim, Su Yeon, Korneliussen, Thorfinn, Vinckenbosch, Nicolas, Tian, Geng, Huerta-Sanchez, Emilia, Feder, Alison F., Grarup, Niels, Jørgensen, Torben, Jiang, Tao, Witte, Daniel R., Sandbæk, Annelli, Hellmann, Ines, Lauritzen, Torsten, Hansen, Torben, Pedersen, Oluf, Wang, Jun, Nielsen, Rasmus
Publicado 2011

Estimation of allele frequency and association mapping using next-generation sequencing data

por Kim, Su Yeon, Lohmueller, Kirk E, Albrechtsen, Anders, Li, Yingrui, Korneliussen, Thorfinn, Tian, Geng, Grarup, Niels, Jiang, Tao, Andersen, Gitte, Witte, Daniel, Jorgensen, Torben, Hansen, Torben, Pedersen, Oluf, Wang, Jun, Nielsen, Rasmus
Publicado 2011

SNP Calling, Genotype Calling, and Sample Allele Frequency Estimation from New-Generation Sequencing Data

por Nielsen, Rasmus, Korneliussen, Thorfinn, Albrechtsen, Anders, Li, Yingrui, Wang, Jun
Publicado 2012

An exome sequencing pipeline for identifying and genotyping common CNVs associated with disease with application to psoriasis

por Coin, Lachlan J.M., Cao, Dandan, Ren, Jingjing, Zuo, Xianbo, Sun, Liangdan, Yang, Sen, Zhang, Xuejun, Cui, Yong, Li, Yingrui, Jin, Xin, Wang, Jun
Publicado 2012

State of the art de novo assembly of human genomes from massively parallel sequencing data

por Li, Yingrui, Hu, Yujie, Bolund, Lars, Wang, Jun
Publicado 2010

SOAPindel: Efficient identification of indels from short paired reads

por Li, Shengting, Li, Ruiqiang, Li, Heng, Lu, Jianliang, Li, Yingrui, Bolund, Lars, Schierup, Mikkel H., Wang, Jun
Publicado 2013

Noninvasive Fetal Trisomy (NIFTY) test: an advanced noninvasive prenatal diagnosis methodology for fetal autosomal and sex chromosomal aneuploidies

por Jiang, Fuman, Ren, Jinghui, Chen, Fang, Zhou, Yuqiu, Xie, Jiansheng, Dan, Shan, Su, Yue, Xie, Jianhong, Yin, Baomin, Su, Wen, Zhang, Huakun, Wang, Wei, Chai, Xianghua, Lin, Linhua, Guo, Hui, Li, Qiyun, Li, Peipei, Yuan, Yuying, Pan, Xiaoyu, Li, Yihan, Liu, Lifu, Chen, Huifei, Xuan, Zhaoling, Chen, Shengpei, Zhang, Chunlei, Zhang, Hongyun, Tian, Zhongming, Zhang, Zhengyu, Jiang, Hui, Zhao, Lijian, Zheng, Weimou, Li, Songgang, Li, Yingrui, Wang, Jun, Wang, Jian, Zhang, Xiuqing
Publicado 2012

A population model for genotyping indels from next-generation sequence data

por Shao, Haojing, Bellos, Evangelos, Yin, Hanjiudai, Liu, Xiao, Zou, Jing, Li, Yingrui, Wang, Jun, Coin, Lachlan J. M.
Publicado 2013

Analyses of pig genomes provide insight into porcine demography and evolution

por Groenen, Martien A. M., Archibald, Alan L., Uenishi, Hirohide, Tuggle, Christopher K., Takeuchi, Yasuhiro, Rothschild, Max F., Rogel-Gaillard, Claire, Park, Chankyu, Milan, Denis, Megens, Hendrik-Jan, Li, Shengting, Larkin, Denis M., Kim, Heebal, Frantz, Laurent A. F., Caccamo, Mario, Ahn, Hyeonju, Aken, Bronwen L., Anselmo, Anna, Anthon, Christian, Auvil, Loretta, Badaoui, Bouabid, Beattie, Craig W., Bendixen, Christian, Berman, Daniel, Blecha, Frank, Blomberg, Jonas, Bolund, Lars, Bosse, Mirte, Botti, Sara, Bujie, Zhan, Bystrom, Megan, Capitanu, Boris, Carvalho-Silva, Denise, Chardon, Patrick, Chen, Celine, Cheng, Ryan, Choi, Sang-Haeng, Chow, William, Clark, Richard C., Clee, Christopher, Crooijmans, Richard P. M. A., Dawson, Harry D., Dehais, Patrice, De Sapio, Fioravante, Dibbits, Bert, Drou, Nizar, Du, Zhi-Qiang, Eversole, Kellye, Fadista, João, Fairley, Susan, Faraut, Thomas, Faulkner, Geoffrey J., Fowler, Katie E., Fredholm, Merete, Fritz, Eric, Gilbert, James G. R., Giuffra, Elisabetta, Gorodkin, Jan, Griffin, Darren K., Harrow, Jennifer L., Hayward, Alexander, Howe, Kerstin, Hu, Zhi-Liang, Humphray, Sean J., Hunt, Toby, Hornshøj, Henrik, Jeon, Jin-Tae, Jern, Patric, Jones, Matthew, Jurka, Jerzy, Kanamori, Hiroyuki, Kapetanovic, Ronan, Kim, Jaebum, Kim, Jae-Hwan, Kim, Kyu-Won, Kim, Tae-Hun, Larson, Greger, Lee, Kyooyeol, Lee, Kyung-Tai, Leggett, Richard, Lewin, Harris A., Li, Yingrui, Liu, Wansheng, Loveland, Jane E., Lu, Yao, Lunney, Joan K., Ma, Jian, Madsen, Ole, Mann, Katherine, Matthews, Lucy, McLaren, Stuart, Morozumi, Takeya, Murtaugh, Michael P., Narayan, Jitendra, Truong Nguyen, Dinh, Ni, Peixiang, Oh, Song-Jung, Onteru, Suneel, Panitz, Frank, Park, Eung-Woo, Park, Hong-Seog, Pascal, Geraldine, Paudel, Yogesh, Perez-Enciso, Miguel, Ramirez-Gonzalez, Ricardo, Reecy, James M., Rodriguez-Zas, Sandra, Rohrer, Gary A., Rund, Lauretta, Sang, Yongming, Schachtschneider, Kyle, Schraiber, Joshua G., Schwartz, John, Scobie, Linda, Scott, Carol, Searle, Stephen, Servin, Bertrand, Southey, Bruce R., Sperber, Goran, Stadler, Peter, Sweedler, Jonathan V., Tafer, Hakim, Thomsen, Bo, Wali, Rashmi, Wang, Jian, Wang, Jun, White, Simon, Xu, Xun, Yerle, Martine, Zhang, Guojie, Zhang, Jianguo, Zhang, Jie, Zhao, Shuhong, Rogers, Jane, Churcher, Carol, Schook, Lawrence B.
Publicado 2012

Single-cell sequencing analysis characterizes common and cell-lineage-specific mutations in a muscle-invasive bladder cancer

por Li, Yingrui, Xu, Xun, Song, Luting, Hou, Yong, Li, Zesong, Tsang, Shirley, Li, Fuqiang, Im, Kate McGee, Wu, Kui, Wu, Hanjie, Ye, Xiaofei, Li, Guibo, Wang, Linlin, Zhang, Bo, Liang, Jie, Xie, Wei, Wu, Renhua, Jiang, Hui, Liu, Xiao, Yu, Chang, Zheng, Hancheng, Jian, Min, Nie, Liping, Wan, Lei, Shi, Min, Sun, Xiaojuan, Tang, Aifa, Guo, Guangwu, Gui, Yaoting, Cai, Zhiming, Li, Jingxiang, Wang, Wen, Lu, Zuhong, Zhang, Xiuqing, Bolund, Lars, Kristiansen, Karsten, Wang, Jian, Yang, Huanming, Dean, Michael, Wang, Jun
Publicado 2012

The sequence and analysis of a Chinese pig genome

por Fang, Xiaodong, Mou, Yulian, Huang, Zhiyong, Li, Yong, Han, Lijuan, Zhang, Yanfeng, Feng, Yue, Chen, Yuanxin, Jiang, Xuanting, Zhao, Wei, Sun, Xiaoqing, Xiong, Zhiqiang, Yang, Lan, Liu, Huan, Fan, Dingding, Mao, Likai, Ren, Lijie, Liu, Chuxin, Wang, Juan, Li, Kui, Wang, Guangbiao, Yang, Shulin, Lai, Liangxue, Zhang, Guojie, Li, Yingrui, Wang, Jun, Bolund, Lars, Yang, Huanming, Wang, Jian, Feng, Shutang, Li, Songgang, Du, Yutao
Publicado 2012

SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

por Luo, Ruibang, Liu, Binghang, Xie, Yinlong, Li, Zhenyu, Huang, Weihua, Yuan, Jianying, He, Guangzhu, Chen, Yanxiang, Pan, Qi, Liu, Yunjie, Tang, Jingbo, Wu, Gengxiong, Zhang, Hao, Shi, Yujian, Liu, Yong, Yu, Chang, Wang, Bo, Lu, Yao, Han, Changlei, Cheung, David W, Yiu, Siu-Ming, Peng, Shaoliang, Xiaoqian, Zhu, Liu, Guangming, Liao, Xiangke, Li, Yingrui, Yang, Huanming, Wang, Jian, Lam, Tak-Wah, Wang, Jun
Publicado 2012

Genetic Architecture of Vitamin B(12) and Folate Levels Uncovered Applying Deeply Sequenced Large Datasets

por Grarup, Niels, Sulem, Patrick, Sandholt, Camilla H., Thorleifsson, Gudmar, Ahluwalia, Tarunveer S., Steinthorsdottir, Valgerdur, Bjarnason, Helgi, Gudbjartsson, Daniel F., Magnusson, Olafur T., Sparsø, Thomas, Albrechtsen, Anders, Kong, Augustine, Masson, Gisli, Tian, Geng, Cao, Hongzhi, Nie, Chao, Kristiansen, Karsten, Husemoen, Lise Lotte, Thuesen, Betina, Li, Yingrui, Nielsen, Rasmus, Linneberg, Allan, Olafsson, Isleifur, Eyjolfsson, Gudmundur I., Jørgensen, Torben, Wang, Jun, Hansen, Torben, Thorsteinsdottir, Unnur, Stefánsson, Kari, Pedersen, Oluf
Publicado 2013

Haplotype-assisted accurate non-invasive fetal whole genome recovery through maternal plasma sequencing

por Chen, Shengpei, Ge, Huijuan, Wang, Xuebin, Pan, Xiaoyu, Yao, Xiaotian, Li, Xuchao, Zhang, Chunlei, Chen, Fang, Jiang, Fuman, Li, Peipei, Jiang, Hui, Zheng, Hancheng, Zhang, Lei, Zhao, Lijian, Wang, Wei, Li, Songgang, Wang, Jun, Wang, Jian, Yang, Huanming, Li, Yingrui, Zhang, Xiuqing
Publicado 2013

An Integrated Tool to Study MHC Region: Accurate SNV Detection and HLA Genes Typing in Human MHC Region Using Targeted High-Throughput Sequencing

por Cao, Hongzhi, Wu, Jinghua, Wang, Yu, Jiang, Hui, Zhang, Tao, Liu, Xiao, Xu, Yinyin, Liang, Dequan, Gao, Peng, Sun, Yepeng, Gifford, Benjamin, D’Ascenzo, Mark, Liu, Xiaomin, Tellier, Laurent C. A. M., Yang, Fang, Tong, Xin, Chen, Dan, Zheng, Jing, Li, Weiyang, Richmond, Todd, Xu, Xun, Wang, Jun, Li, Yingrui
Publicado 2013

Exome Sequencing and Linkage Analysis Identified Tenascin-C (TNC) as a Novel Causative Gene in Nonsyndromic Hearing Loss

por Zhao, Yali, Zhao, Feifan, Zong, Liang, Zhang, Peng, Guan, Liping, Zhang, Jianguo, Wang, Dayong, Wang, Jing, Chai, Wei, Lan, Lan, Li, Qian, Han, Bing, Yang, Ling, Jin, Xin, Yang, Weiyan, Hu, Xiaoxiang, Wang, Xiaoning, Li, Ning, Li, Yingrui, Petit, Christine, Wang, Jun, Wang, Huanming Yang Jian, Wang, Qiuju
Publicado 2013