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1por Yang, Yongil, Labbé, Jessy, Muchero, Wellington, Yang, Xiaohan, Jawdy, Sara S., Kennedy, Megan, Johnson, Jenifer, Sreedasyam, Avinash, Schmutz, Jeremy, Tuskan, Gerald A., Chen, Jin-Gui“…Expansion of the Populus LecRLKs (PtLecRLKs) occurred partially through tandem duplication. …”
Publicado 2016
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2por Liu, Degao, Tang, Dan, Xie, Meng, Zhang, Jin, Zhai, Longmei, Mao, Jiangping, Luo, Chao, Lipzen, Anna, Zhang, Yu, Savage, Emily, Yuan, Guoliang, Guo, Hao-Bo, Tadesse, Dimiru, Hu, Rongbin, Jawdy, Sara, Cheng, Hua, Li, Linling, Yer, Huseyin, Clark, Miranda M, Sun, Huayu, Shi, Jiyuan, Budhathoki, Roshani, Kumar, Rahul, Kamuda, Troy, Li, Yanjun, Pennacchio, Christa, Barry, Kerrie, Schmutz, Jeremy, Berry, Rajiv, Muchero, Wellington, Chen, Jin-Gui, Li, Yi, Tuskan, Gerald A, Yang, Xiaohan“…Deciduous woody plants like poplar (Populus spp.) have seasonal bud dormancy. It has been challenging to simultaneously delay the onset of bud dormancy in the fall and advance bud break in the spring, as bud dormancy, and bud break were thought to be controlled by different genetic factors. …”
Publicado 2022
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3por Yao, Tao, Yuan, Guoliang, Lu, Haiwei, Liu, Yang, Zhang, Jin, Tuskan, Gerald A, Muchero, Wellington, Chen, Jin-Gui, Yang, Xiaohan“…The genus Populus has long been used for environmental, agroforestry and industrial applications worldwide. …”
Publicado 2023
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4por Abraham, Paul E., Garcia, Benjamin J., Gunter, Lee E., Jawdy, Sara S., Engle, Nancy, Yang, Xiaohan, Jacobson, Daniel A., Hettich, Robert L., Tuskan, Gerald A., Tschaplinski, Timothy J.“…In total, we identified 108,012 peptide sequences across both experiments that provided insight into the quantitative state of 22,737 Populus gene models and 8,199 functional protein groups in response to drought. …”
Publicado 2018
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5por Zhang, Jin, Xie, Meng, Li, Mi, Ding, Jinhua, Pu, Yunqiao, Bryan, Anthony C., Rottmann, William, Winkeler, Kimberly A., Collins, Cassandra M., Singan, Vasanth, Lindquist, Erika A., Jawdy, Sara S., Gunter, Lee E., Engle, Nancy L., Yang, Xiaohan, Barry, Kerrie, Tschaplinski, Timothy J., Schmutz, Jeremy, Tuskan, Gerald A., Muchero, Wellington, Chen, Jin‐Gui“…Here, we report the functional characterization of a PFD gene from Populus deltoides, designated as PdPFD2.2. There are two copies of PFD2 in Populus, and PdPFD2.2 was ubiquitously expressed with high transcript abundance in the cambial region. …”
Publicado 2019
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6por Bryan, Anthony C., Jawdy, Sara, Gunter, Lee, Gjersing, Erica, Sykes, Robert, Hinchee, Maud A. W., Winkeler, Kimberly A., Collins, Cassandra M., Engle, Nancy, Tschaplinski, Timothy J., Yang, Xiaohan, Tuskan, Gerald A., Muchero, Wellington, Chen, Jin‐Gui“…Here, we describe a previously uncharacterized laccase from Populus, encoded by locus Potri.008G064000, whose reduced expression resulted in transgenic Populus trees with changes in syringyl/guaiacyl ratios as well as altered sugar release phenotypes. …”
Publicado 2016
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7por Plett, Jonathan M., Yin, Hengfu, Mewalal, Ritesh, Hu, Rongbin, Li, Ting, Ranjan, Priya, Jawdy, Sara, De Paoli, Henrique C., Butler, George, Burch-Smith, Tessa Maureen, Guo, Hao-Bo, Ju Chen, Chun, Kohler, Annegret, Anderson, Ian C., Labbé, Jessy L., Martin, Francis, Tuskan, Gerald A., Yang, Xiaohan“…Using RNA sequencing of Populus trichocarpa roots in mutualistic symbiosis with the ectomycorrhizal fungus Laccaria bicolor, we sought to determine if host plants also contain genes encoding effector-like proteins. …”
Publicado 2017
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8por Mewalal, Ritesh, Yin, Hengfu, Hu, Rongbin, Jawdy, Sara, Vion, Patrice, Tuskan, Gerald A., Le Tacon, François, Labbé, Jessy L., Yang, Xiaohan“…Ecto- and endo-mycorrhizal colonization of Populus roots have a positive impact on the overall tree health and growth. …”
Publicado 2019
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9por Payyavula, Raja S., Badmi, Raghuram, Jawdy, Sara S., Rodriguez, Miguel, Gunter, Lee, Sykes, Robert W., Winkeler, Kimberly A., Collins, Cassandra M., Rottmann, William H., Chen, Jin‐Gui, Yang, Xiaohan, Tuskan, Gerald A, Kalluri, Udaya C.“…The functional aspects of SND1 homologs in the woody Populus have been studied through transgenic manipulation. …”
Publicado 2022
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10por Yang, Yongil, Yoo, Chang Geun, Winkeler, Kimberly A., Collins, Cassandra M., Hinchee, Maud A. W., Jawdy, Sara S., Gunter, Lee E., Engle, Nancy L., Pu, Yunqiao, Yang, Xiaohan, Tschaplinski, Timothy J., Ragauskas, Arthur J., Tuskan, Gerald A., Chen, Jin-Gui“…A total of 52 DUF231-containing proteins were identified in the Populus genome. In P. deltoides transgenic lines overexpressing PdDUF231A (OXPdDUF231A), glucose and cellulose contents were increased. …”
Publicado 2017
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11por Badmi, Raghuram, Payyavula, Raja S., Bali, Garima, Guo, Hao-Bo, Jawdy, Sara S., Gunter, Lee E., Yang, Xiaohan, Winkeler, Kimberly A., Collins, Cassandra, Rottmann, William H., Yee, Kelsey, Rodriguez, Miguel, Sykes, Robert W., Decker, Stephen R., Davis, Mark F., Ragauskas, Arthur J., Tuskan, Gerald A., Kalluri, Udaya C.“…The present study describes a new functional role of PdIQD10, a Populus gene belonging to the IQ67-Domain1 family of IQD genes, in impacting biomass formation and chemistry. …”
Publicado 2018
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12por Yang, Yongil, Yoo, Chang Geun, Rottmann, William, Winkeler, Kimberly A., Collins, Cassandra M., Gunter, Lee E., Jawdy, Sara S., Yang, Xiaohan, Pu, Yunqiao, Ragauskas, Arthur J., Tuskan, Gerald A., Chen, Jin-Gui“…RESULTS: Here we report the functional characterization of Populus deltoides WOOD-ASSOCIATED NAC DOMAIN protein 3 (PdWND3A), a sequence homolog of Arabidopsis VND4 and VND5 that are members of transcription factor networks regulating secondary cell wall biosynthesis. …”
Publicado 2019
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13por Biswal, Ajaya K, Hao, Zhangying, Pattathil, Sivakumar, Yang, Xiaohan, Winkeler, Kim, Collins, Cassandra, Mohanty, Sushree S, Richardson, Elizabeth A, Gelineo-Albersheim, Ivana, Hunt, Kimberly, Ryno, David, Sykes, Robert W, Turner, Geoffrey B, Ziebell, Angela, Gjersing, Erica, Lukowitz, Wolfgang, Davis, Mark F, Decker, Stephen R, Hahn, Michael G, Mohnen, Debra“…Two GAUT12 homologs exist in Populus trichocarpa, PtGAUT12.1 and PtGAUT12.2. Knockdown expression of both genes simultaneously has been shown to reduce xylan content in Populus wood. …”
Publicado 2015
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14por Yuan, Guoliang, Liu, Yang, Yao, Tao, Muchero, Wellington, Chen, Jin-Gui, Tuskan, Gerald A., Yang, Xiaohan“…As an important model for poplar genomics and biotechnology research, eastern cottonwood (Populus deltoides) clone WV94 can be transformed by A. tumefaciens, but several challenges remain unresolved, including the relatively low transformation efficiency and the relatively high rate of false positives from antibiotic-based selection of transgenic events. …”
Publicado 2023
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15por Yang, Yongil, Yoo, Chang Geun, Guo, Hao-Bo, Rottmann, William, Winkeler, Kimberly A., Collins, Cassandra M., Gunter, Lee E., Jawdy, Sara S., Yang, Xiaohan, Guo, Hong, Pu, Yunqiao, Ragauskas, Arthur J., Tuskan, Gerald A., Chen, Jin-Gui“…We report the functional characterization of one member of DUF266 proteins in Populus, PdDUF266A. PdDUF266A was ubiquitously expressed with high abundance in the xylem. …”
Publicado 2017
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16por Biswal, Ajaya K., Atmodjo, Melani A., Pattathil, Sivakumar, Amos, Robert A., Yang, Xiaohan, Winkeler, Kim, Collins, Cassandra, Mohanty, Sushree S., Ryno, David, Tan, Li, Gelineo-Albersheim, Ivana, Hunt, Kimberly, Sykes, Robert W., Turner, Geoffrey B., Ziebell, Angela, Davis, Mark F., Decker, Stephen R., Hahn, Michael G., Mohnen, Debra“…Downregulation of GAUT12.1 in Populus deltoides was recently reported to result in improved biomass saccharification, plant growth, and biomass yield. …”
Publicado 2018
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17por Hyden, Brennan, Yuan, Guoliang, Liu, Yang, Smart, Lawrence B., Tuskan, Gerald A., Yang, Xiaohan“…While protocols for shoot regeneration in tissue culture and production of stably transformed lines have greatly advanced this research in the closely related genus Populus, a lack of efficient methods for regeneration and transformation has stymied similar advancements in willow functional genomics. …”
Publicado 2022
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18“…CONCLUSIONS: Case studies of the microRNA167 genes in plants and Xyloglucan ndotransglycosylase/Hydrolase family in Populus trichocarpa were presented to show the utility of the software. …”
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19por Hyden, Brennan, Carper, Dana L., Abraham, Paul E., Yuan, Guoliang, Yao, Tao, Baumgart, Leo, Zhang, Yu, Chen, Cindy, O'Malley, Ronan, Chen, Jin‐Gui, Yang, Xiaohan, Hettich, Robert L., Tuskan, Gerald A., Smart, Lawrence B.“…The results of this study provide further evidence to support models for the roles of ARR17 and GATA15 as master regulator genes of sex determination in S. purpurea , contributing to a regulatory system that is notably different from that of its sister genus Populus. Evidence was also obtained for the roles of two transcription factors, an AP2/ERF family gene and a homeodomain‐like transcription factor, in downstream regulation of sex dimorphism.…”
Publicado 2023
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20por Tyler, Ludmila, Bragg, Jennifer N, Wu, Jiajie, Yang, Xiaohan, Tuskan, Gerald A, Vogel, John P“…Glycoside hydrolase genes have been previously cataloged for Oryza sativa (rice), the model dicotyledonous plant Arabidopsis thaliana, and the fast-growing tree Populus trichocarpa (poplar). To improve our understanding of glycoside hydrolases in plants generally and in grasses specifically, we annotated the glycoside hydrolase genes in the grasses Brachypodium distachyon (an emerging monocotyledonous model) and Sorghum bicolor (sorghum). …”
Publicado 2010
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