The resistomes of rural and urban pigs and poultry in Ghana

por Jensen, Emilie Egholm Bruun, Sedor, Victoria, Eshun, Emmanuel, Njage, Patrick, Otani, Saria, Aarestrup, Frank M.
Publicado 2023

Very early life microbiome and metabolome correlates with primary vaccination variability in children

por Shaffer, Michael, Best, Katharine, Tang, Catherine, Liang, Xue, Schulz, Steven, Gonzalez, Eduardo, White, Cory H., Wyche, Thomas P., Kang, John, Wesseling, Hendrik, Topçuoğlu, Begüm D., Cairns, Thomas, Sana, Theodore R., Kaufhold, Robin M., Maritz, Julia M., Woelk, Christopher H., Swaminathan, Gokul, Norton, James E., Pichichero, Michael E.
Publicado 2023

The heterogenous and diverse population of prophages in Mycobacterium genomes

por Abad, Lawrence, Gauthier, Christian H., Florian, Isabella, Jacobs-Sera, Deborah, Hatfull, Graham F.
Publicado 2023

Multi-site performance evaluation of the Alinity m Molecular assay for quantifying Epstein-Barr virus DNA in plasma samples

por Wessels, Els, Albert, Eliseo, Vreeswijk, Tom, Claas, Eric C. J., Giménez, Estela, Reinhardt, Birgit, Sasaki, Mark M., Navarro, David
Publicado 2023

Akkermansia muciniphila supplementation improves glucose tolerance in intestinal Ffar4 knockout mice during the daily light to dark transition

por Wang, Zhe, Cui, Siyuan, Zhang, TingTing, Wang, Wei, Li, JiaYu, Chen, Y. Q., Zhu, Sheng long
Publicado 2023

Phylogenomic analysis of a global collection of Escherichia coli ST38: evidence of interspecies and environmental transmission?

por Roy Chowdhury, Piklu, Hastak, Priyanka, DeMaere, Matthew, Wyrsch, Ethan, Li, Dmitriy, Elankumaran, Paarthiphan, Dolejska, Monika, Browning, Glenn F., Marenda, Mark S., Gottlieb, Thomas, Cheong, Elaine, Merlino, John, Myers, Garry S. A., Djordjevic, Steven P.
Publicado 2023

Sensitivity of rapid antigen tests against SARS-CoV-2 Omicron and Delta variants

por Rao, Anuradha, Westbrook, Adrianna, Bassit, Leda, Parsons, Richard, Fitts, Eric, Greenleaf, Morgan, McLendon, Kaleb, Sullivan, Julie A., O’Sick, William, Baugh, Tyler, Bowers, Heather B., Frank, Filipp, Wang, Ethan, Le, Mimi, Frediani, Jennifer, Roychoudhury, Pavitra, Greninger, Alexander L., Jerris, Robert, Pollock, Nira R., Ortlund, Eric A., Roback, John D., Lam, Wilbur A., Piantadosi, Anne
Publicado 2023

Erratum for Ricci et al., “Host Traits and Phylogeny Contribute to Shaping Coral-Bacterial Symbioses”

por Ricci, Francesco, Tandon, Kshitij, Black, Jay R., Lê Cao, Kim-Anh, Blackall, Linda L., Verbruggen, Heroen
Publicado 2023

Arsenophonus symbiosis with louse flies: multiple origins, coevolutionary dynamics, and metabolic significance

por Martin Říhová, Jana, Gupta, Shruti, Darby, Alistair C., Nováková, Eva, Hypša, Václav
Publicado 2023

Machine learning uncovers the Pseudomonas syringae transcriptome in microbial communities and during infection

por Bajpe, Heera, Rychel, Kevin, Lamoureux, Cameron R., Sastry, Anand V., Palsson, Bernhard O.
Publicado 2023

Epidemiological characteristics of multidrug-resistant Acinetobacter baumannii ST369 in Anhui, China

por Huang, Yi, Ali, Md Roushan, Li, Wei, Wang, Wanying, Dai, Yuanyuan, Lu, Huaiwei, He, Zhien, Li, Yujie, Sun, Baolin
Publicado 2023

Rhizosphere and detritusphere habitats modulate expression of soil N-cycling genes during plant development

por Sieradzki, Ella T., Nuccio, Erin E., Pett-Ridge, Jennifer, Firestone, Mary K.
Publicado 2023

PhamClust: a phage genome clustering tool using proteomic equivalence

por Gauthier, Christian H., Hatfull, Graham F.
Publicado 2023

Development of the early-life gut microbiome and associations with eczema in a prospective Chinese cohort

por Cheung, Man Kit, Leung, Ting Fan, Tam, Wing Hung, Leung, Agnes S. Y., Chan, Oi Man, Ng, Rita W. Y., Yau, Jennifer W. K., Yuen, Lai-yuk, Tong, Sylvia L. Y., Ho, Wendy C. S., Yeung, Apple C. M., Chen, Zigui, Chan, Paul K. S.
Publicado 2023

Deep mutational scanning of influenza A virus neuraminidase facilitates the identification of drug resistance mutations in vivo

por Wang, Sihan, Zhang, Tian-hao, Hu, Menglong, Tang, Kejun, Sheng, Li, Hong, Mengying, Chen, Dongdong, Chen, Liubo, Shi, Yuan, Feng, Jun, Qian, Jing, Sun, Lifeng, Ding, Kefeng, Sun, Ren, Du, Yushen
Publicado 2023

Multicenter performance evaluation of the Alinity m CMV assay for quantifying cytomegalovirus DNA in plasma samples

por Lee, Miae, Albert, Eliseo, Wessels, Els, Kim, Soo-Kyung, Chung, Hae-Sun, Giménez, Estela, Vreeswijk, Tom, Claas, Eric C. J., Tai, Yan Chin, Reinhardt, Birgit, Sasaki, Mark M., Navarro, David
Publicado 2023

Identification of hidden N4-like viruses and their interactions with hosts

por Zheng, Kaiyang, Liang, Yantao, Paez-Espino, David, Zou, Xiao, Gao, Chen, Shao, Hongbing, Sung, Yeong Yik, Mok, Wen Jye, Wong, Li Lian, Zhang, Yu-Zhong, Tian, Jiwei, Chen, Feng, Jiao, Nianzhi, Suttle, Curtis A., He, Jianfeng, McMinn, Andrew, Wang, Min
Publicado 2023

Diagnostic performance of host protein signatures as a triage test for active pulmonary TB

por Koeppel, Lisa, Denkinger, Claudia M., Wyss, Romain, Broger, Tobias, Chegou, Novel N., Dunty, Jill M., Scott, Kerry, Cáceres, Tatiana, Dutoit, Elloise, Ugarte-Gil, Cesar, Nicol, Mark, Gotuzzo, Eduardo, Corstjens, Paul L. A. M., Geluk, Annemieke, Sutherland, Jayne, Sigal, George B., Moreau, Emmanuel, Albertini, Audrey, Mantsoki, Anna, Ongarello, Stefano, Walzl, Gerhard, Fernandez Suarez, Marta
Publicado 2023

Metagenomic and metabolomic analyses reveal the role of gut microbiome-associated metabolites in diarrhea calves

por Shi, Zhihai, Wang, Yazhou, Yan, Xiangzhou, Ma, Xiaoya, Duan, Anqin, Hassan, Faiz-ul, Wang, Wenjia, Deng, Tingxian
Publicado 2023

Dual RNA-seq identifies genes and pathways modulated during Clostridioides difficile colonization

por Frost, Lucy R., Stark, Richard, Anonye, Blessing O., MacCreath, Thomas O., Ferreira, Ludmila R. P., Unnikrishnan, Meera
Publicado 2023