“…Toward the expansion of the genetic alphabet of DNA, we present highly efficient unnatural base pair systems as an artificial third base pair for PCR. …”
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“…Our in silico simulations using a two-letter alphabet show that template-directed ligation and high concatenation rates counter compositional bias and shift the pool toward longer sequences, permitting greater exploration of sequence space and stable folding. …”
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“…So, we have proposed to look at protein flexibility using novel methods: (i) using a structural alphabet and (ii) combining classical X-ray B-factor data and molecular dynamics simulations. …”
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“…The subtle changes in the dynamics and conformations of Ras upon effector binding require an analysis that targets local changes independent of global motions. Using a structural alphabet, a computational procedure is proposed to quantify local conformational changes. …”
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“…The time complexities of most of the planted motif search algorithms depend exponentially on the alphabet size. Recently a new version of the motif search problem has been introduced by Kuksa and Pavlovic. …”
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“…First, it is still unknown whether the direction of the bias is related to the magnitude of the number presented, or to their position in an ordinal sequence, and thus could be elicited by other non-numerical ordinal sequences such as letters of the alphabet. Second, it is still unclear whether the observed interactions generalize to other continuous dimension of magnitude such as brightness. …”
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“…CONTENTS: The 188 pages of the book are distributed in 5 chapters in Part I and 249 entries ordered by the letters of Alphabet in Part II creating an A to Z of publication strategy. …”
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“…To this end, subjects performed either mental arithmetic or imagined vocalization of the English alphabet as a baseline task with very low cognitive loading. …”
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“…When run on a sample of total length n, with m reads of maximum length ℓ each, on an alphabet of total size σ, our algorithms take O(n(t+logσ)) time and just 2n+o(n)+O(max{ℓ σlogn,K logm}) bits of space in addition to the index and to the union-find data structure, where K is a measure of the redundancy of the sample and t is the query time of the union-find data structure. …”
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“…Several device architectures are described to ensure that, once captured, the biopolymer meets two other requirements for Darwinism, homochirality and a small building block “alphabet.” This approach is compared and contrasted with alternative biomolecule detection approaches that seek homochirality and constrained alphabets in non-encoded biopolymers. …”
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“…Deciphering the carbohydrate alphabet is problematic due to its unique complexity among biomolecules. …”
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“…We compared five TVA parameters quantifying the aforementioned cognitive abilities, obtained by modeling accuracy data on a whole/partial report paradigm using conventional alphabet stimuli versus the food stimuli. Significant correlations were found for all TVA parameters, indicating a high parallel-form reliability. …”
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“…We created two rewriteable atomic memories (1.1 petabits per in(2)), storing the alphabet letter-by-letter in 8 bits and a piece of music in 192 bits. …”
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“…We ran our algorithm on DNA and amino acid alphabets to cover all k-mers for different values of k and k-mer multiplicity. …”
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“…The TL priming effect is well documented for European languages that are written using the Roman alphabet. Unlike these languages, Arabic has a unique position-dependent allography whereby some letters change shape according to their position within a word. …”
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“…METHODS: Among patients who underwent surgery for large orbital floor fractures, 24 who underwent the conventional onlay implanting method were compared with 21 who underwent the novel γ implanting method that two implant sheets were stacked and bent to resemble the shape of the Greek alphabet γ. When inserting a γ-shaped implant, the posterior ledge of the orbital floor was placed between the two sheets and the bottom sheet was impacted onto the posterior wall of the maxilla to play a fixative role while the top sheet was placed above the residual orbital floor to support orbital contents. …”
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“…In contrast to the case of fixed, finite alphabets, here we consider the case of parameterized alphabets. …”
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“…In particular, we present results that allow us to test the effect of the Generalized NK (GNK) model’s interpretable parameters—sequence length, alphabet size, and assumed interactions between sequence positions—on the sparsity of fitness functions sampled from the model and, consequently, the number of measurements required to exactly recover these functions. …”
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“…Of note, the letters of the sugar code system (third alphabet of life) excel in coding capacity by making an unsurpassed versatility for isomer (code word) formation possible by variability in anomery and linkage position of the glycosidic bond, ring size and branching. …”
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“…Moreover, the convergence probability of the modulation alphabet after MP decoding in the current iteration is used as the initial probability of MP decoding in the next iteration to accelerate the convergence rate of MP decoding. …”
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