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201por Silvestre-Ryan, Jordi, Wang, Yujie, Sharma, Mehak, Lin, Stephen, Shen, Yolanda, Dider, Shihab, Holmes, Ian“…AVAILABILITY AND IMPLEMENTATION: Machine Boss is released under the BSD-3 open source license and is available from http://machineboss.org/. …”
Publicado 2020
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202por Sachs, Christian Carsten, Ruzaeva, Karina, Seiffarth, Johannes, Wiechert, Wolfgang, Berkels, Benjamin, Nöh, Katharina“…AVAILABILITY AND IMPLEMENTATION: CellSium is free and open source software under the BSD license, implemented in Python, available at github.com/modsim/cellsium (DOI: 10.5281/zenodo.6193033), along with documentation, usage examples and Docker images. …”
Publicado 2022
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203“…AVAILABILITY AND IMPLEMENTATION: scFates is released as open-source software under the BSD 3-Clause ‘New’ License and is available from the Python Package Index at https://pypi.org/project/scFates/. …”
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204“…AVAILABILITY AND IMPLEMENTATION: Simpleaf is written in Rust and released under a BSD 3-Clause license. It is freely available from its GitHub repository https://github.com/COMBINE-lab/simpleaf, and via bioconda. …”
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205por Pratt-Szeliga, Philip C., Skewes, Aaron D., Yan, Jinyuan, Welch, Laura G., Welch, Roy D.“…This version, called Openmods, has already been used to create Xenorhabdusbase (http://xenorhabdusbase.bact.wisc.edu), Caulobacterbase (http://caulobacterbase.bsd.uchicago.edu) and soon Bdellovibriobase.…”
Publicado 2012
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206“…It is an open source package and freely available under the terms of the modified BSD license.…”
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207por Nakatake, Yuhki, Fujii, Setsuko, Masui, Shinji, Sugimoto, Toshimi, Torikai-Nishikawa, Satomi, Adachi, Kenjiro, Niwa, Hitoshi“…Various drug resistance genes, such as neo, pac, hph, zeo, bsd, and hisD, have been equally used as selection markers to isolate a transfectant without considering their dose-dependent characters. …”
Publicado 2013
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208“…We present the general workflow of the pipeline, along with a typical use case for the software. sfDM is written in Python and is freely available as an open-source package under the Berkley Software Distribution (BSD) license to promote transparency and reproducibility.…”
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209“…Pharmit is available under a dual BSD/GPL open-source license.…”
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210por Dao, David, Fraser, Adam N., Hung, Jane, Ljosa, Vebjorn, Singh, Shantanu, Carpenter, Anne E.“…Availability and Implementation: CellProfiler Analyst 2.0 is free and open source, available at http://www.cellprofiler.org and from GitHub (https://github.com/CellProfiler/CellProfiler-Analyst) under the BSD license. It is available as a packaged application for Mac OS X and Microsoft Windows and can be compiled for Linux. …”
Publicado 2016
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211“…AVAILABILITY AND IMPLEMENTATION: CapSim is publicly available under BSD license at https://github.com/Devika1/capsim. …”
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212por Cassidy, Kevin C., Šefčík, Jan, Raghav, Yogindra, Chang, Alexander, Durrant, Jacob D.“…We release ProteinVR under the open-source BSD-3-Clause license. A copy of the program is available free of charge from http://durrantlab.com/protein-vr/, and a working version can be accessed at http://durrantlab.com/pvr/.…”
Publicado 2020
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213“…The effective dose in the PA view was 0.4–0.61-fold that in the AP view. BSD measurements were almost equivalent to the BODs obtained using PMC at all exposure settings. …”
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214por Sánchez Rodríguez, Filomeno, Mesdaghi, Shahram, Simpkin, Adam J., Burgos-Mármol, J. Javier, Murphy, David L., Uski, Ville, Keegan, Ronan M., Rigden, Daniel J.“…ConPlot is licensed under the BSD 3-Clause. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.…”
Publicado 2021
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215por Quetschlich, Daniel, Esser, Tim K, Newport, Thomas D, Fiorentino, Francesco, Shutin, Denis, Chen, Siyun, Davis, Rachel, Lovera, Silvia, Liko, Idlir, Stansfeld, Phillip J, Robinson, Carol V“…The source code and documentation can be accessed at https://github.com/d-que/navia, under the BSD 2-Clause licence. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.…”
Publicado 2021
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216“…The results showed that SMCPSO-FSRCNN achieved the most significant improvement, being about 4.84% better than the FSRCNN model, using the BSD100 data set at a scale factor of 2. In addition, a chest X-ray super-resolution images classification test experiment was conducted, and the experimental results demonstrated that the reconstruction ability of this model could improve the classification accuracy by 13.46%; in particular, the precision and recall rate of COVID-19 were improved by 45.3% and 6.92%, respectively.…”
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217“…It is released under a BSD license, and its source code is publicly accessible on GitHub (https://github.com/LemonJust/vodex). …”
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218“…The experimental results on Set5, Set14, BSD100, and Urban datasets show that our proposed DVDR-SRGAN model is improved in terms of PSNR, SSIM, and LPIPS compared with the Bicubic, SRGAN, ESRGAN, Beby-GAN, and SPSR models.…”
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219por Chojnowski, Grzegorz“…The doubleHelix program source code is available under BSD-3 license at https://gitlab.com/gchojnowski/doublehelix.…”
Publicado 2023
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220“…In addition, we show that delivery to the vacuole often requires multiple additional ubiquitin ligases or adaptors, including the RING domain ligase Pib1, and the adaptors Bsd2, Ear1 and Ssh4, some acting redundantly. We discuss the similarities and differences in the requirements for regulation of different transporters.…”
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