-
321por Ghaffarizadeh, Ahmadreza, Heiland, Randy, Friedman, Samuel H., Mumenthaler, Shannon M., Macklin, Paul“…The PhysiCell source code, examples, documentation, and support are available under the BSD license at http://PhysiCell.MathCancer.org and http://PhysiCell.sf.net.…”
Publicado 2018
Enlace del recurso
Enlace del recurso
Enlace del recurso
Online Artículo Texto -
322por Bokulich, Nicholas A., Kaehler, Benjamin D., Rideout, Jai Ram, Dillon, Matthew, Bolyen, Evan, Knight, Rob, Huttley, Gavin A., Gregory Caporaso, J.“…CONCLUSIONS: Our results illustrate the importance of parameter tuning for optimizing classifier performance, and we make recommendations regarding parameter choices for these classifiers under a range of standard operating conditions. q2-feature-classifier and tax-credit are both free, open-source, BSD-licensed packages available on GitHub.…”
Publicado 2018
Enlace del recurso
Enlace del recurso
Enlace del recurso
Online Artículo Texto -
323por Liyanage, Ruvini, Perera, Oshini, Lakmini, Gusthingna W. A. S., Weththasinghe, Pabodha, Visvanathan, Rizliya, Jayathilake, Chathuni, Jayawardana, Barana C., Vidanarachchi, Janak, Sivakanesan, Ramiah“…Seven weeks old male Wistar rats were fed 20% fat as a control (CD), for comparison with 20% fat‐enriched diets containing 20% whole raw cowpea diets (Bombay Raw Diet; BRD and MI35 Raw Diet; MRD), boiled cowpea diets (Bombay Boiled Diet; BBD and MI35 Boiled Diet; MBD) and sprouted cowpea diet (Bombay Sprouted Diet; BSD) for 6 weeks. The increase in serum total cholesterol as a result of high‐fat diet was significantly countered by boiled and raw cowpea‐incorporated diet‐fed rats. …”
Publicado 2018
Enlace del recurso
Enlace del recurso
Enlace del recurso
Online Artículo Texto -
324“…In this study, we used reductive soil disinfestation (RSD), also named anaerobic soil disinfestation (ASD) and biological soil disinfestation (BSD), as a representative method for disease management and cucumber damping-off diseased soil as a model system to identify the disease-suppressive agents in artificially managed soil. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso
Online Artículo Texto -
325por Ecale Zhou, Carol L, Malfatti, Stephanie, Kimbrel, Jeffrey, Philipson, Casandra, McNair, Katelyn, Hamilton, Theron, Edwards, Robert, Souza, Brian“…AVAILABILITY AND IMPLEMENTATION: multiPhATE was implemented in Python 3.7, and runs as a command-line code under Linux or Unix. multiPhATE is freely available under an open-source BSD3 license from https://github.com/carolzhou/multiPhATE. …”
Publicado 2019
Enlace del recurso
Enlace del recurso
Enlace del recurso
Online Artículo Texto -
326
-
327por Kieser, Silas, Brown, Joseph, Zdobnov, Evgeny M., Trajkovski, Mirko, McCue, Lee Ann“…The source code for ATLAS is freely available, distributed under a BSD-3 license. CONCLUSIONS: ATLAS provides a user-friendly, modular and customizable Snakemake workflow for metagenome data processing; it is easily installable with conda and maintained as open-source on GitHub at https://github.com/metagenome-atlas/atlas.…”
Publicado 2020
Enlace del recurso
Enlace del recurso
Enlace del recurso
Online Artículo Texto -
328“…Here, we examine the consequences of a trematode infestation (black spot disease, BSD) for fetal development and adult behavior in 19 natural populations of the placental live-bearing fish species Poeciliopsis retropinna (Poeciliidae) in Costa Rica. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso
Online Artículo Texto -
329“…All code is provided in the form of Jupyter Notebooks and is available on GitHub with a permissive BSD-3 open-source license: https://github.com/vfscalfani/CSN_tutorial GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13321-022-00664-x.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso
Online Artículo Texto -
330por Chang, Christine H, Nelson, William C, Jerger, Abby, Wright, Aaron T, Egbert, Robert G, McDermott, Jason E“…Code and data used in this article, along with tutorial notebooks, are available at http://github.com/PNNL-CompBio/Snekmer under an open-source BSD-3 license. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics Advances online.…”
Publicado 2023
Enlace del recurso
Enlace del recurso
Enlace del recurso
Online Artículo Texto -
331por Li, Yifan, Wang, Silian, Zhu, Zhenbiao, Chen, Liwei, Shi, Zhangpeng, Ye, Xiaojian, Xu, Wei, Li, ZhikunEnlace del recurso
Publicado 2023
Enlace del recurso
Enlace del recurso
Online Artículo Texto -
332por Kiss, Laszlo, Szoverfi, Zsolt, Bereczki, Ferenc, Eltes, Peter Endre, Szollosi, Balazs, Szita, Julia, Hoffer, Zoltan, Lazary, AronEnlace del recurso
Publicado 2023
Enlace del recurso
Enlace del recurso
Online Artículo Texto -
333por Kraemer, Lars, Beszteri, Bánk, Gäbler-Schwarz, Steffi, Held, Christoph, Leese, Florian, Mayer, Christoph, Pöhlmann, Kevin, Frickenhaus, Stephan“…The software is available under the OpenBSD License [1,2]. The high efficiency of our automated marker design workflow has been confirmed in three microsatellite development projects.…”
Publicado 2009
Enlace del recurso
Enlace del recurso
Enlace del recurso
Texto -
334por Clarkson, Matthew J., Zombori, Gergely, Thompson, Steve, Totz, Johannes, Song, Yi, Espak, Miklos, Johnsen, Stian, Hawkes, David, Ourselin, Sébastien“…NiftyLink is provided open-source under a BSD license and available from http://github.com/NifTK/NiftyLink. …”
Publicado 2014
Enlace del recurso
Enlace del recurso
Enlace del recurso
Online Artículo Texto -
335por Daily, Jeff“…Source code is available from https://github.com/jeffdaily/parasail under the Battelle BSD-style license. CONCLUSIONS: Applications that require optimal alignment scores could benefit from the improved performance. …”
Publicado 2016
Enlace del recurso
Enlace del recurso
Enlace del recurso
Online Artículo Texto -
336por Fujiwara, Yasushi, Manabe, Hideki, Izumi, Bunichiro, Tanaka, Hiroyuki, Kawai, Kazumi, Tanaka, NobuhiroEnlace del recurso
Publicado 2016
Enlace del recurso
Enlace del recurso
Online Artículo Texto -
337
-
338por Ducatman, Barbara S., Hashmi, Mahreen, Darrow, Morgan, Flanagan, Melina B., Courtney, Pamela, Ducatman, Alan M.“…We investigated the influence of pathology data to improve patient outcomes in the treatment of high-grade cervical neoplasia in a joint pathology and gynecology collaboration. Two of us (B.S.D. and M.D.) reviewed all cytology, colposcopy and surgical pathology results, patient history, and pregnancy outcomes from all patients with loop electrosurgical excision procedure specimens for a 33-month period (January 2011-September 2013). …”
Publicado 2016
Enlace del recurso
Enlace del recurso
Enlace del recurso
Online Artículo Texto -
339por Hussein, Hala E., Bastos, Reginaldo G., Schneider, David A., Johnson, Wendell C., Adham, Fatma K., Davis, William C., Laughery, Jacob M., Herndon, David R., Alzan, Heba F., Ueti, Massaro W., Suarez, Carlos E.“…The hap2 gene was disrupted by transfecting B. bovis with a plasmid containing the flanking regions of the hap2 gene and the GPF-BSD gene under the control of the ef-1α-B promoter. …”
Publicado 2017
Enlace del recurso
Enlace del recurso
Enlace del recurso
Online Artículo Texto -
340