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  1. 1001
    “…To address this, we have developed CRISPR‐TAPE, a protein‐centric gRNA design algorithm that allows users to target specific residues, or amino acid types within proteins. gRNA outputs can be customized to support maximal efficacy of homology‐directed repair for engineering purposes, removing time‐consuming post hoc curation, simplifying gRNA outputs and reducing CPU times.…”
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    CRISPR‐TAPE: protein‐centric CRISPR guide design for targeted proteome engineering
  2. 1002
    por Gutenkunst, Ryan N
    Publicado 2021
    “…I show that running dadi on a Graphics Processing Unit can dramatically speed computation compared with the CPU implementation, with minimal user burden. Motivated by this speed increase, I also extended dadi to four- and five-population models. …”
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    dadi.CUDA: Accelerating Population Genetics Inference with Graphics Processing Units
  3. 1003
    “…Savings of up to 10-fold in CPU time are demonstrated. These developments allowed us to evaluate ACE2/ACE selectivity in silico, which is a crucial checkpoint for developing chemical probes for ACE2.…”
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    Virtual Screening in Search for a Chemical Probe for Angiotensin-Converting Enzyme 2 (ACE2)
  4. 1004
    por Kostrzewa, Łukasz, Nowak, Robert
    Publicado 2022
    “…Performance analysis shows that our method is fast and could be used in practice on typical server hardware with 2 Processors (Central Processing Units, CPUs) or with a CPU and a Graphics processing unit (GPU).…”
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    Polish Court Ruling Classification Using Deep Neural Networks
  5. 1005
    “…<p> On GPUs up to a 30x speedup over tuned CPU code has been achieved. On the Cell, we can match or exceed the performance of vendor tools in tuned applications, but with much less developer effort. …”
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    The RapidMind Development Platform for Cell, GP-GPU, and Multicore CPUs
  6. 1006
    por Gligorov, V.V.
    Publicado 2015
    “…I cover the present status of real-time data analysis at the LHC, before explaining why the future upgrades of the LHC experiments will increase the volume of data which can be sent off the detector and into off-the-shelf data processing facilities (such as CPU or GPU farms) to tens of exabytes per year. …”
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    Real-time data analysis at the LHC: present and future
  7. 1007
    por Filipcic, Andrej
    Publicado 2017
    “…One of the big changes for Run-2 was the adoption of the Derivation Framework, which moves the chaotic CPU and data intensive part of the user analysis into the centrally organized train production, delivering derived AOD datasets to user groups for final analysis. …”
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    ATLAS Distributed Computing experience and performance during the LHC Run-2
  8. 1008
    por Promberger, Laura
    Publicado 2022
    “…The first part characterizes popular general-purpose compression algorithms and their performance using ARM aarch64, IBM ppc64le, and Intel x86\_64 CPU architectures. Their performance is found to be independent of the underlying CPU architecture, making each architecture a viable choice. …”
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    Compute, Storage and Throughput Trade-offs for High-Energy Physics Data Acquisition
  9. 1009
    “…Both the mixed linear model (MLM) and fixed and random model circulating probability unification (FarmCPU) approaches were employed for the analysis. …”
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    Genome-Wide Association Study of Body Conformation Traits in a Three-Way Crossbred Commercial Pig Population
  10. 1010
    “…None of the NTG mice or CPu-injected M20 mice showed DA neurodegeneration. …”
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    Intrastriatal injection of α-synuclein can lead to widespread synucleinopathy independent of neuroanatomic connectivity
  11. 1011
    “…The CMLM also found significance on chromosome 19, whereas FarmCPU also identified significance on chromosomes 4, 9, and 16. …”
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    Genome-wide association mapping of resistance to a Brazilian isolate of Sclerotinia sclerotiorum in soybean genotypes mostly from Brazil
  12. 1012
    “…The significant clusters intersected tractography based networks seeded in M1, M2, S1, V1 and CPu at levels > 80%. We found that 89% of the significant cluster belonged to a network seeded in the contralateral M1, and 85% to one seeded in the contralateral M2. …”
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    Magnetic resonance imaging of mouse brain networks plasticity following motor learning
  13. 1013
    “…Based on the BraTS19 and BraTS20 dataset, our FPGA-based brain tumor segmentation accelerator is 5.21 and 44.47 times faster than the TITAN V GPU and the Xeon CPU. In addition, by comparing energy efficiency, our design can achieve 11.22 and 82.33 times energy efficiency than GPU and CPU, respectively. …”
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    MRI-based brain tumor segmentation using FPGA-accelerated neural network
  14. 1014
    “…In adult brains, there was an increase of ionized calcium binding adaptor molecule 1 (IBA-1) positive cells in the caudate-putamen (CPu) and nucleus accumbens (NAc), along with a decrease of glial fibrillary acidic protein (GFAP) immunoreactivity in the CPu. …”
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    Adolescent self-administration of the synthetic cannabinoid receptor agonist JWH-018 induces neurobiological and behavioral alterations in adult male mice
  15. 1015
    “…Lagrangian statistics reported in both qualitative and quantitative fashions show globally a very good agreement with reference LES and experimental databases at a fraction of the CPU power needed for optimal LES.…”
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    CFD Simulation of Particle-Laden Flow in a 3D Differentially Heated Cavity Using Coarse Large Eddy Simulation
  16. 1016
    por Grehant, Xavier, Dana, J M
    Publicado 2008
    “…Tycoon has been developed at HP Labs to optimise resource usage in creating an economy where users bid to access virtual machines and compete for CPU cycles. SmartDomains provides a peer-to-peer layer that automates virtual machines deployment using a description language and deployment engine from HP Labs. …”
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    Providing Virtual Execution Environments: A Twofold Illustration
  17. 1017
    “…The pMSSM contains the most relevant 25 weak-scale MSSM parameters, which are simultaneously fit using `nested sampling' Monte Carlo techniques in more than 15 years of CPU time. We calculate the Bayesian evidence for the pMSSM and constrain its parameters and observables in the context of two widely different, but reasonable, priors to determine which inferences are robust. …”
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    Fitting the Phenomenological MSSM
  18. 1018
    por Grosse-Oetringhaus, J F
    Publicado 2008
    “…The current setup and ongoing development towards disk quotas and CPU fairshare are described. Furthermore, the integration of PROOF into ALICE's software framework (AliRoot) is discussed.…”
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    The CERN analysis facility: a PROOF cluster for day-one physics analysis
  19. 1019
    “…LHCb aims to use its O(20000) CPU cores in the High Level Trigger (HLT) and its 120 TB Online storage system for data reprocessing during LHC shutdown periods. …”
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    LHCB: Non-POSIX File System for the LHCB Online Event Handling
  20. 1020
    “…Synthetic graphical views for all operational parameters, correlations, state of services and applications as well as the full history of all monitoring metrics are available for the ent ire system that now encompasses 85 sites all over the world, mo re than 14000 CPU cores and 10PB of storage.…”
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    Automated agents for management and control of the ALICE Computing Grid
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