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  1. 1741
    “…For running a large number of simulations in parallel, up to 360-fold decrease in simulation runtime is attained when compared to single CPU implementations. Availability: http://cuda-sim.sourceforge.net/ Contact: christopher.barnes@imperial.ac.uk; m.stumpf@imperial.ac.uk Supplementary information: Supplementary data are available at Bioinformatics online.…”
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    GPU accelerated biochemical network simulation
  2. 1742
    por Xu, Meilian, Thulasiraman, Parimala
    Publicado 2011
    “…Therefore, we present optimization techniques to efficiently map the algorithm on the Cell BE for improved performance over CPU version. We compare the performance of our proposed algorithm on Cell BE to that of Sun Fire ×4600, a shared memory machine. …”
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    Mapping Iterative Medical Imaging Algorithm on Cell Accelerator
  3. 1743
    “…The GPS SDR design is based on an optimized desktop parallel processing architecture using a quad-core Central Processing Unit (CPU) coupled with a new generation Graphics Processing Unit (GPU) having massively parallel processors. …”
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    A Real-Time Capable Software-Defined Receiver Using GPU for Adaptive Anti-Jam GPS Sensors
  4. 1744
    por Seelow, Dominik, Schuelke, Markus
    Publicado 2012
    “…HomozygosityMapper also generates files for conventional linkage analyses which are already restricted to the possible disease regions, hence superseding CPU-intensive genome-wide analyses. HomozygosityMapper is freely available at http://www.homozygositymapper.org/.…”
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    HomozygosityMapper2012—bridging the gap between homozygosity mapping and deep sequencing
  5. 1745
    “…RESULTS: We show that a single GPU can accelerate the EpiSimdemics computation kernel by a factor of 6 and the entire application by a factor of 3.3, compared to the execution time on a single core. When 8 CPU cores and 2 GPU devices are utilized, the speed-up of the computational kernel increases to 9.5. …”
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    Online Artículo Texto
    High-performance biocomputing for simulating the spread of contagion over large contact networks
  6. 1746
    “…The rapid but accurate triage of patients in an ED CPU is essential to their care, and stress-only imaging and new CZT cameras allow for shorter test time, lower radiation doses and lower costs while demonstrating good clinical outcomes. …”
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    Stress Myocardial Perfusion Imaging in the Emergency Department - New Techniques for Speed and Diagnostic Accuracy
  7. 1747
    “…The speed of each facet of the multi-functional OCT CPU-GPU hybrid acquisition system, intensity, phase retardation, and flow, were separately demonstrated by imaging a horseshoe crab lateral compound eye, a non-uniformly heated chicken muscle, and a microfluidic device. …”
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    GPU accelerated real-time multi-functional spectral-domain optical coherence tomography system at 1300nm
  8. 1748
    “…Real-time data acquisition, processing, motion compensation, and image visualization and saving were implemented on a custom CPU-GPU hybrid architecture. We performed 10× zero padding to the raw spectrum to obtain 0.16 µm position accuracy with a compensation rate of 460 Hz. …”
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    Motion-compensated hand-held common-path Fourier-domain optical coherence tomography probe for image-guided intervention
  9. 1749
    “…To cope with the ongoing genomic data deluge, in March 2012, our computer previous system was totally replaced by a commodity cluster-based system that boasts 122.5 TFlops of CPU capacity and 5 PB of storage space. During this upgrade, it was considered crucial to replace and refactor substantial portions of the DDBJ software systems as well. …”
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    DDBJ new system and service refactoring
  10. 1750
    “…In this paper, we propose a cloud-based web environment, called web Flexible Receptor Docking Workflow (wFReDoW), which reduces the CPU time in the molecular docking simulations of FFR models to small molecules. …”
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    wFReDoW: A Cloud-Based Web Environment to Handle Molecular Docking Simulations of a Fully Flexible Receptor Model
  11. 1751
    “…RESULTS: As expected, the CFPM results were very similar to those of the CFM for both diagnosis groups. The CPU time for the CFPM was substantially shorter than the CFM. …”
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    Heterogeneity and event dependence in the analysis of sickness absence
  12. 1752
    “…Large-scale signal-processing procedures such as k-domain linearization, fast Fourier transform (FFT), and log-scaling signal processing can be rapidly applied using graphics-processing-unit (GPU) accelerated processing rather than central-processing-unit (CPU) processing. The Labview-based system resolution is 1,024 × 512 pixels, and the frame rate is 56 frames/s, useful for real-time display. …”
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    Development of Real-Time Dual-Display Handheld and Bench-Top Hybrid-Mode SD-OCTs
  13. 1753
    “…Moreover, a 100 times speedup compared to a modern CPU with SIMD support is reported. A complete, working vision system realized on Xilinx VC707 evaluation board is also presented. …”
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    Efficient Hardware Implementation of the Horn-Schunck Algorithm for High-Resolution Real-Time Dense Optical Flow Sensor
  14. 1754
    “…We integrate the large-scale 3D point clouds into a nonground PDB and a node-based terrain mesh using the CPU. Subsequently, we program a graphics processing unit (GPU) to generate the TDB by mapping the triangles in the terrain mesh onto the captured video images. …”
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    Real-Time Terrain Storage Generation from Multiple Sensors towards Mobile Robot Operation Interface
  15. 1755
    “…AWE-WQ is scalable to thousands of nodes and supports dynamic allocation of computer resources, heterogeneous resource usage (such as central processing units (CPU) and graphical processing units (GPUs) concurrently), seamless heterogeneous cluster usage (i.e., campus grids and cloud providers), and support for arbitrary MD codes such as GROMACS, while ensuring that all statistics are unbiased. …”
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    AWE-WQ: Fast-Forwarding Molecular Dynamics Using the Accelerated Weighted Ensemble
  16. 1756
    “…We show that a combination of hill-climbing approaches and a stochastic perturbation method can be time-efficiently implemented. If we allow the same CPU time as RAxML and PhyML, then our software IQ-TREE found higher likelihoods between 62.2% and 87.1% of the studied alignments, thus efficiently exploring the tree-space. …”
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    IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
  17. 1757
    “…While many fixed-order and parton shower programs allow the evaluation of PDF uncertainties for a single PDF set at no additional CPU cost, this feature is not universal, and, moreover, the a posteriori combination of the predictions using at least three different PDF sets is still required. …”
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    A compression algorithm for the combination of PDF sets
  18. 1758
    “…CUDA-MCC achieved 45 times and 391 times faster than its CPU version on a single NVIDIA Tesla K20m GPU card and a dual-NVIDIA Tesla K20m GPU card, respectively, under the experimental results.…”
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    Accelerating Multiple Compound Comparison Using LINGO-Based Load-Balancing Strategies on Multi-GPUs
  19. 1759
    por Bywater, Robert P., Veryazov, Valera
    Publicado 2015
    “…Such calculations are resource-consuming (in terms of memory, CPU and other computational imperatives) which is the reason why most previous studies were restricted to the two simplest amino-acid residue types, glycine and alanine. …”
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    The dipeptide conformations of all twenty amino acid types in the context of biosynthesis
  20. 1760
    “…In addition, by applying a fast computational algorithm for holograms, we achieved hologram calculations at ~12 ms per hologram with 4 CPU cores.…”
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    Aerial projection of three-dimensional motion pictures by electro-holography and parabolic mirrors
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