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1761por Tennessen, Kristin, Andersen, Evan, Clingenpeel, Scott, Rinke, Christian, Lundberg, Derek S, Han, James, Dangl, Jeff L, Ivanova, Natalia, Woyke, Tanja, Kyrpides, Nikos, Pati, Amrita“…The procedure operates successfully at a rate of ~0.30 CPU core hours per megabase of sequence and can be applied to any type of genome sequence.…”
Publicado 2016
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1762por Mei, Gang“…The proposed convex hull algorithm termed as CudaChain consists of two stages: (1) two rounds of preprocessing performed on the GPU and (2) the finalization of calculating the expected convex hull on the CPU. Those interior points locating inside a quadrilateral formed by four extreme points are first discarded, and then the remaining points are distributed into several (typically four) sub regions. …”
Publicado 2016
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1763por Yang, Shu-Sheng, Lin, Li, Liu, Yue, Wang, Jie, Chu, Jiang, Zhang, Teng, Ning, Lin-Na, Shi, Yan, Fang, Ying-Yan, Zeng, Peng, Wang, Jian-Zhi, Qiu, Ming-Yi, Tian, Qing“…Here, 0.4 units of collagenase VII were injected into the left caudate putamen (CPu) to duplicate ICH rat models. In the brains of ICH rats, microglia/macrophages, the nearest cells to the hemorrhagic center, were observed as ameboid and Prussian-blue positive. …”
Publicado 2016
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1764“…It can be completely integrated in an ASIC (application specific integrated circuit) or incorporated in a CPU- or micro-controller-based system.…”
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1765“…The work involved more than 300 individual absolute alchemical binding free energy parallel molecular dynamics calculations and over 1 million CPU hours on national computing clusters and a local campus computational grid. …”
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1766“…Experimental results of registration quality and execution efficiency on the large amount of medical images show that our algorithm achieves a better registration accuracy in terms of the differences between the best deformation fields and ground truth and a speedup of 17 times over the single-threaded CPU implementation due to the powerful parallel computing ability of Graphics Processing Unit (GPU).…”
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1767por Liu, Fang, Velikina, Julia V., Block, Walter F., Kijowski, Richard, Samsonov, Alexey A.“…GPU execution allowed ∼200× improvement in computational speed over standard CPU. As a cross-platform, open-source, extensible environment for customizing virtual MRI experiments, MRiLab streamlines the development of new MRI methods, especially those aiming to infer quantitatively tissue composition and microstructure.…”
Publicado 2016
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1768por Sulimov, Alexey V., Zheltkov, Dmitry A., Oferkin, Igor V., Kutov, Danil C., Katkova, Ekaterina V., Tyrtyshnikov, Eugene E., Sulimov, Vladimir B.“…The SOL-P program is able to perform docking of a flexible ligand into the active site of the target protein with several dozens of protein moveable atoms: the native crystallized ligand pose is correctly found as the global energy minimum in the search space with 157 dimensions using 4700 CPU ∗ h at the Lomonosov supercomputer.…”
Publicado 2017
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1769“…This program not only augments the functionality of plot_taxa_summary.py but is also very fast in terms of CPU time and user friendly.…”
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1770por Abdelaziz, Ahmed, Fong, Ang Tan, Gani, Abdullah, Garba, Usman, Khan, Suleman, Akhunzada, Adnan, Talebian, Hamid, Choo, Kim-Kwang Raymond“…Moreover, proposed method also shows reasonable CPU utilization results. Furthermore, the proposed mechanism makes possible to handle unexpected load fluctuations while maintaining a continuous network operation, even when there is a controller failure. …”
Publicado 2017
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1771“…We compare both classification performance and CPU efficiency for three classifiers: 1) the proposed algorithm (MCC-classifier), the Bayes classifier with a default threshold (MCC-base) and imbalanced SVM (SVM-imba). …”
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1772por Jansen, Hans J., Liem, Michael, Jong-Raadsen, Susanne A., Dufour, Sylvie, Weltzien, Finn-Arne, Swinkels, William, Koelewijn, Alex, Palstra, Arjan P., Pelster, Bernd, Spaink, Herman P., Thillart, Guido E. van den, Dirks, Ron P., Henkel, Christiaan V.“…For this 860 Mbp genome, the entire computational process takes two days on a single CPU. The resulting genome assembly significantly improves on a previous draft based on short reads only, both in terms of contiguity (N50 1.2 Mbp) and structural quality. …”
Publicado 2017
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1773“…With the inexorable growth of sequence data volume and CPU core counts, the speed and scalability of read-processing tools becomes ever-more important. …”
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1774por Przybylski, Adrian, Thiel, Björn, Keller-Findeisen, Jan, Stock, Bernd, Bates, Mark“…We measured a speed increase of up to 42 times when comparing Gpufit with an identical CPU-based algorithm, with no loss of precision or accuracy. …”
Publicado 2017
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1775por Vögele, Christian, van Hoorn, André, Schulz, Eike, Hasselbring, Wilhelm, Krcmar, Helmut“…Workload-specific characteristics (e.g., session lengths and arrival rates) and performance characteristics (e.g., response times and CPU utilizations) show that the extracted workloads match the measured workloads with high accuracy.…”
Publicado 2016
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1776“…RESULTS: When applied to mosaic penicillin binding protein (PBP) genes in Streptococcus pneumoniae, we found near perfect concordance with assembled contigs at a fraction of the CPU time. Multilocus sequence typing (MLST) with this approach was able to bypass de novo assemblies. …”
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1777“…Besides, because most of verifications are performed by record-nodes and all related data is stored at the blockchain, thus the insurance company, servers and the hospital only need small memory and CPU. Finally, we deploy the MIStore on the Ethererum blockchain and give the corresponding performance evaluation.…”
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1778“…We show that 40.8% of the theorems can be proved in a push-button mode in about 40 s of real time on a 8-CPU system.…”
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1779por Peng, Shaoliang, Cheng, Minxia, Huang, Kaiwen, Cui, YingBo, Zhang, Zhiqiang, Guo, Runxin, Zhang, Xiaoyu, Yang, Shunyun, Liao, Xiangke, Lu, Yutong, Zou, Quan, Shi, Benyun“…RESULTS: In this paper, we accelerate MEME algorithm targeted on Intel Many Integrated Core (MIC) Architecture and present a parallel implementation of MEME called MIC-MEME base on hybrid CPU/MIC computing framework. Our method focuses on parallelizing the starting point searching method and improving iteration updating strategy of the algorithm. …”
Publicado 2018
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1780por Yusifli, Elmar, Yahiaoui, Reda, Qaisar, Saeed Mian, Addouche, Mahmoud, Al-Mahdawi, Basil, Bourouina, Hicham, Herlem, Guillaume, Gharbi, Tijani“…It is done without employing any Nios processor or System on a Programmable Chip (SOPC) builder based Central Processing Unit (CPU) core. It keeps the system efficient in terms of resource utilization and power consumption. …”
Publicado 2017
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