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Mostrando 261 - 280 Resultados de 385 Para Buscar '"Cif."', tiempo de consulta: 0.23s Limitar resultados
  1. 261
    “…A unit cell model of the R(I) phase is produced in the crystallographic information file (CIF) format, with each molecule represented by a superposition of four rotational positions, each with 25% occupancy. …”
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    Structure of the Hexadecane Rotator Phase: Combination of X-ray Spectra and Molecular Dynamics Simulation
  2. 262
    “…The grid parameters such as bucky factor (BF), selectivity (Σ), Contrast improvement factor (CIF), and signal-to-noise improvement factor (SIF) were determined following the measurements of primary, scatter, and total radiations with a digital fluoroscopic system for the thicknesses of 5, 10, 15, 20, and 25 cm polymethyl methacrylate blocks at the tube voltages of 70, 90, and 120 kVp. …”
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    Investigation of grid performance using simple image quality tests
  3. 263
    “…Building upon this past work, this article presents a program, RABDAM, to calculate the B (Damage) metric for all selected atoms within any standard-format PDB or mmCIF file. RABDAM provides several useful outputs to assess the extent of damage suffered by an input PX structure. …”
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    RABDAM: quantifying specific radiation damage in individual protein crystal structures
  4. 264
    “…If PDB2INS is provided with a four-character PDB code, both the PDB file and the accompanying mmCIF-format reflection data file (if available) are accessed via the internet from the PDB public archive [Read et al. (2011). …”
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    PDB2INS: bridging the gap between small-molecule and macromolecular refinement
  5. 265
    “…Notably, homologs of cytoplasmic incompatibility factor (cif) genes were present, indicating that these strains possess the capacity to induce the cytoplasmic incompatibility phenotype, which allows Wolbachia to spread through host populations. …”
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    Stable high-density and maternally inherited Wolbachia infections in Anopheles moucheti and Anopheles demeilloni mosquitoes
  6. 266
    “…Shry is implemented in Python 3 and uses the CIF format as the standard for both reading and writing the reference and generated sets of substituted structures. …”
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    Shry: Application of Canonical Augmentation to the Atomic Substitution Problem
  7. 267
    “…At a mean follow-up of 11.6 ± 4.15 years, 11 patients (7.7%) required re-operation on the ascending aorta. At 16 years, the CIF of aortic-related events was 29.4 ± 7.2%; the freedom from cardiac death was 89.2 ± 3.7%. …”
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    Long Term Results of Reduction Ascending Aortoplasty
  8. 268
    “…Upon fertilization, the sperm derived from an infected male is only compatible with an egg harboring a compatible Wolbachia strain, this sperm leading otherwise to embryonic death. The Wolbachia Cif factors CidA and CidB responsible for CI and its neutralization function as a Toxin-Antitoxin system in the mosquito host Culex pipiens. …”
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    Functional analysis of Wolbachia Cid effectors unravels cooperative interactions to target host chromatin during replication
  9. 269
    “…A genomic analysis highlighted Wolbachia regions diverged between the 2 strains involving 17 genes, and homologs of the wmk and cif genes implicated in MK and CI were identified in the Wolbachia assembly. …”
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    A male-killing Wolbachia endosymbiont is concealed by another endosymbiont and a nuclear suppressor
  10. 270
    “…This paper introduces MotiveValidator, a web-based application for the validation of ligands and residues in PDB or PDBx/mmCIF format files provided by the user. Specifically, MotiveValidator is able to evaluate in a straightforward manner whether the ligand or residue being studied has a correct annotation (3-letter code), i.e. if it has the same topology and stereochemistry as the model ligand or residue with this annotation. …”
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    MotiveValidator: interactive web-based validation of ligand and residue structure in biomolecular complexes
  11. 271
    “…By deamidating Gln40 of Nedd8 to glutamate (Q40E), the bacterial cycle-inhibiting factor (Cif) family is able to inhibit CRL E3 activities, thereby interfering with cellular functions. …”
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    Gln40 deamidation blocks structural reconfiguration and activation of SCF ubiquitin ligase complex by Nedd8
  12. 272
    “…Most current approaches either limit ligand restraints to those that can be readily described in the Crystallographic Information File (CIF) format, thus sacrificing chemical flexibility and energetic accuracy, or they employ protocols that substantially lengthen the refinement time, potentially hindering rapid automated refinement workflows. …”
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    Improved ligand geometries in crystallographic refinement using AFITT in PHENIX
  13. 273
    “…BACKGROUND: The cause-specific under-five mortality of Bangladesh has been studied by fitting cumulative incidence function (CIF) based Fine and Gray competing risk regression model (1999). …”
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    Fine and Gray competing risk regression model to study the cause-specific under-five child mortality in Bangladesh
  14. 274
    “…As the application can use both PDB and mmCIF formats, it can be leveraged to analyze a wide spectrum of biomacromolecular structures, e.g. stemming from NMR, X-ray and cryo-EM techniques. …”
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    MOLEonline: a web-based tool for analyzing channels, tunnels and pores (2018 update)
  15. 275
    “…The syntax adopted to format entries in the ROD is based on the worldwide recognized and used CIF format, which offers a simple way for data exchange, writing and description. …”
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    Raman Open Database: first interconnected Raman–X-ray diffraction open-access resource for material identification
  16. 276
    por Zheng, Chuting, Li, Yi, Yu, Jihong
    Publicado 2020
    “…For each aluminophosphate structure, we have assigned a unique index code and extracted its key chemical and crystallographic information from the original literature and the associated CIF file, such as the name, chemical formula, extra-framework species, Al/P ratio, space group, and unit cell parameters of the compound. …”
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    Database of open-framework aluminophosphate structures
  17. 277
    “…In this sense, the calculated statistical values for the improved proposed model are within the expected ranges of reliability (X2 = 0.6, X2/DF = 0.3, GFI = 0.985, CIF = 0.985, RMSEA = 0) by considering the literature.…”
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    Emulating and Evaluating Virtual Remote Laboratories for Cybersecurity †
  18. 278
    por Faezov, Bulat, Dunbrack, Roland L.
    Publicado 2021
    “…The server and program can take a list of PDB entries or a list of UniProt identifiers (e.g., “P04637” or “P53_HUMAN”) and provide renumbered files in mmCIF format and the legacy PDB format for both asymmetric unit files and biological assembly files provided by PDBe.…”
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    PDBrenum: A webserver and program providing Protein Data Bank files renumbered according to their UniProt sequences
  19. 279
    “…RING now also supports the mmCIF format and provides typed interactions for the entire PDB chemical component dictionary, including nucleic acids. …”
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    RING 3.0: fast generation of probabilistic residue interaction networks from structural ensembles
  20. 280
    “…Salt stress causes the accumulation of GSO1 in two specific and spatially defined areas of the root tip: in the endodermis section undergoing Casparian strip (CS) formation, where it reinforces the CIF‐GSO1‐SGN1 axis for CS barrier formation; and in the meristem, where it creates the GSO1‐SOS2‐SOS1 axis for Na(+) detoxification. …”
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    A salt stress‐activated GSO1‐SOS2‐SOS1 module protects the Arabidopsis root stem cell niche by enhancing sodium ion extrusion
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