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Mostrando 101 - 120 Resultados de 166 Para Buscar '"Circo"', tiempo de consulta: 0.12s Limitar resultados
  1. 101
    “…RESULT: We have developed CGDV (Circos for Genomics and Transcriptomics Data Visualization), a webtool based on Circos, for seamless and automated visualization of a variety of large scale genomics and transcriptomics data. …”
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    CGDV: a webtool for circular visualization of genomics and transcriptomics data
  2. 102
    “…In particular, the use of circos representation of MI networks and the visualization of the cumulative MI and proximity MI concepts is novel.…”
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    MISTIC: mutual information server to infer coevolution
  3. 103
    “…When compared to the equivalent heatmaps and/or Circos plots, the graph-based visualizations more intuitively depicted the changes in genome organization described in the original studies. …”
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    GrapHi-C: graph-based visualization of Hi-C datasets
  4. 104
    “…In the last 15 years, we have seen rapid changes in circular visualization tools after the de-velopment of the circos tool with 1-2 tools published per year. Herein we have summarized and revisited all these tools until the third quarter of 2018.…”
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    Overview of Genomic Tools for Circular Visualization in the Next-generation Genomic Sequencing Era
  5. 105
    “…The package can generate a comprehensive set of publication-ready figures such as heatmaps, dotplots, circos plots and network diagrams, providing a useful resource for researchers working on cell–cell interactions. …”
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    CCPlotR: an R package for the visualization of cell–cell interactions
  6. 106
    “…The software also produces Circos diagrams visualizing high level genomic architecture for rearrangement analyses. …”
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    C-Sibelia: an easy-to-use and highly accurate tool for bacterial genome comparison
  7. 107
    “…Data output includes graphical formats such as heatmap, box-, volcano- and circos-plots. This resource is designed to assist proteome-wide data mining of pathophysiological mechanism without a need for programming knowledge.…”
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    PhosPiR: an automated phosphoproteomic pipeline in R
  8. 108
    “…AVAILABILITY AND IMPLEMENTATION: PanExplorer is written in Perl CGI and relies on several JavaScript libraries for visualization (hotmap.js, MauveViewer, CircosJS). It is freely available at http://panexplorer.southgreen.fr. …”
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    PanExplorer: a web-based tool for exploratory analysis and visualization of bacterial pan-genomes
  9. 109
    “…The review covers visualization methods employed by tools such as Circos, Gitools, the Integrative Genomics Viewer, Cytoscape, Savant Genome Browser, StratomeX and platforms such as cBio Cancer Genomics Portal, IntOGen, the UCSC Cancer Genomics Browser, the Regulome Explorer and the Cancer Genome Workbench.…”
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    Visualizing multidimensional cancer genomics data
  10. 110
    “…Stratified DE subgroups were visualized by chord diagrams, co-occurrence networks, and Circos plot analyses to improve interpretability. …”
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    Smartphone-based digital phenotyping for dry eye toward P4 medicine: a crowdsourced cross-sectional study
  11. 111
    por Jing, Yumei
    Publicado 2022
    “…Combining the data description of UPI and SCL-90 and the corresponding task requirement analysis, the multisource information fusion visualization based on the Circos diagram is designed and realized, and the parallel coordinate visualization is established. …”
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    Intelligent Assessment of Mental Health Based on Multisource Information Fusion
  12. 112
    “…The most recent developments in the AnnotSV webserver are: (i) updated annotations sources and ranking, (ii) three novel output formats to allow diverse utilization (analysis, pipelines), as well as (iii) two novel user interfaces including an interactive circos view.…”
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    The AnnotSV webserver in 2023: updated visualization and ranking
  13. 113
    “…I-COMS automatically builds the required MSA for the calculation and produces a rich visualization of either intraprotein and/or interprotein covariating positions in a circos representation. Furthermore, comparison between any two methods is available as well as the overlap between any or all four methodologies. …”
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    I-COMS: Interprotein-COrrelated Mutations Server
  14. 114
    “…The results visualization framework has been reworked for improved performance, compatibility and user experience. It includes a circos representation of the information contained in the alignment, an interactive covariation network, a 3D structure viewer and a sequence logo. …”
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    MISTIC2: comprehensive server to study coevolution in protein families
  15. 115
    “…Gene locus analysis and circos plots indicated the distribution and relationship of these genes in cotton genomes. …”
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    Genome scale analysis of 1-aminocyclopropane-1-carboxylate oxidase gene family in G. barbadense and its functions in cotton fiber development
  16. 116
    “…Whereas, based on PCA plots and Circos plot, the microbial community structure has changed significantly. …”
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    Microbial community diversity and potential functionality in response to dam construction along the Three Gorge Reservoir, China
  17. 117
    “…The nine genes were selected to characterize their phylogenetic reconstruction with homologous genes of Arabidopsis thaliana, and a Circos diagram was generated to understand the relationships among the selected genes. …”
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    A Multistep Screening Method to Identify Genes Using Evolutionary Transcriptome of Plants
  18. 118
    “…The data visualization section summarized the biofilm stages targeted (Circos plot); interaction maps (Cytoscape) and chemicals diversification (CheS-Mapper) of the agents. …”
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    aBiofilm: a resource of anti-biofilm agents and their potential implications in targeting antibiotic drug resistance
  19. 119
    “…A regulatory network of predicted candidate miRNAs of sugarcane with SCBV—ORFs, generated using Circos—is used to identify novel targets. The predicted data provide useful information for the development of SCBV-resistant sugarcane plants.…”
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    In silico identification of sugarcane (Saccharum officinarum L.) genome encoded microRNAs targeting sugarcane bacilliform virus
  20. 120
    por Liu, Shu-Cheng, Ju, Yan-Ru, Lu, Chin Lung
    Publicado 2022
    “…In the output page, Multi-CSAR displays its multiple reference-derived scaffold in two graphical representations (i.e. Circos plot and dotplot) for the users to visually validate the correctness of scaffolded contigs and in a tabular representation to further validate the scaffold in detail. …”
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    Multi-CSAR: a web server for scaffolding contigs using multiple reference genomes
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