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5por Torbenson, Michael, Desmet, Valeer, Denk, Helmut, Callea, Francesco, Burt, Alastair D., Hübscher, Stefan G., Terracciano, Luigi, Dienes, Hans-Peter, Goodman, Zachary D., Bedossa, Pierre, Wanless, Ian R., Roberts, Eve A., Brunt, Elizabeth M., Clouston, Andrew D., Gouw, Annette S.H., Kleiner, David, Schirmacher, Peter, Tiniakos, Dina“…The success of the Gnomes’ approach provides a road map for future small scientific groups. …”
Publicado 2020
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7por Bowman, Samuel“…GNOME is a straightforward and easy to build sample handling apparatus, designed to prepare dissolved nitrogen oxide species in aqueous environmental samples. …”
Publicado 2023
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8por Szalaj, Przemyslaw, Michalski, Paul J., Wróblewski, Przemysław, Tang, Zhonghui, Kadlof, Michal, Mazzocco, Giovanni, Ruan, Yijun, Plewczynski, Dariusz“…Users submit a bedpe (paired-end BED format) file containing the locations and strengths of long range contact points, and 3D-GNOME simulates the structure and provides a convenient user interface for further analysis. …”
Publicado 2016
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9“…The web server is hosted and performs calculations on DGX A100 GPU servers that provide optimal performance with multitasking. 3D-GNOME 3.0 web server provides unique insights into the topological mechanism of human variations at the population scale with high speed-up and is freely available at https://3dgnome.mini.pw.edu.pl/.…”
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10por Wlasnowolski, Michal, Sadowski, Michal, Czarnota, Tymon, Jodkowska, Karolina, Szalaj, Przemyslaw, Tang, Zhonghui, Ruan, Yijun, Plewczynski, Dariusz“…In this work, we describe an improved version of our integrated web service for structural modeling of three-dimensional genome (3D-GNOME), which now incorporates all types of SVs to model changes to the reference 3D conformation of chromatin. …”
Publicado 2020
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11por Kalies, Stefan, Gentemann, Lara, Schomaker, Markus, Heinemann, Dag, Ripken, Tammo, Meyer, Heiko“…Gold nanoparticle mediated (GNOME) laser transfection/perforation fulfills the demands of a reliable transfection technique. …”
Publicado 2014
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12por Becker, Annegret, Lehrich, Tina, Kalies, Stefan, Heisterkamp, Alexander, Ngezahayo, Anaclet“…At the biology level, GNOME-LP/C-CPE-AuNP-treated cells bound annexin V and showed reduced mitochondria activity. …”
Publicado 2019
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13por Szałaj, Przemysław, Tang, Zhonghui, Michalski, Paul, Pietal, Michal J., Luo, Oscar J., Sadowski, Michał, Li, Xingwang, Radew, Kamen, Ruan, Yijun, Plewczynski, Dariusz“…Here, we report the development of 3D-GNOME (3-Dimensional Genome Modeling Engine), a complete computational pipeline for 3D simulation using ChIA-PET data. 3D-GNOME consists of three integrated components: a graph-distance-based heat map normalization tool, a 3D modeling platform, and an interactive 3D visualization tool. …”
Publicado 2016
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14por Becker, Annegret, Leskau, Miriam, Schlingmann-Molina, Barbara L., Hohmeier, Susanne C., Alnajjar, Suhayla, Murua Escobar, Hugo, Ngezahayo, Anaclet“…Furthermore, most of the claudin non-expressing cells treated with C-CPE-AuNP were not killed by GNOME-LP. Additionally, application of C-CPE-AuNP to spheroids formed by MCF-7 and OE-33 cells grown in Matrigel reduced spheroid area. …”
Publicado 2018
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15por Alnajjar, Suhayla, Nolte, Ingo, Becker, Annegret, Schille, Jan Torben, Trakooljul, Nares, Frank, Marcus, Ngezahayo, Anaclet, Murua Escobar, Hugo“…Cancer cells ablation was demonstrated using a combination of GNOME-LP and C-CPE-AuNPs treatment reducing tumor cell viability to less than 10% depending on cell line. …”
Publicado 2021
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16“…Analyses of MITEs in the yellow fever mosquito identified its youngest MITE family, designated as Gnome, that contains at least 116 identical copies. …”
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17“…First, three different DNA extraction methods (G’NOME, QIAGEN, and PROMEGA) were compared with regard to their efficiency, i.e., the quality and quantity of DNA recovered from feces of 10 healthy volunteers. …”
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18por Afach, Samer, Buchler, Ben C., Budker, Dmitry, Dailey, Conner, Derevianko, Andrei, Dumont, Vincent, Figueroa, Nataniel L., Gerhardt, Ilja, Grujić, Zoran D., Guo, Hong, Hao, Chuanpeng, Hamilton, Paul S., Hedges, Morgan, Jackson Kimball, Derek F., Kim, Dongok, Khamis, Sami, Kornack, Thomas, Lebedev, Victor, Lu, Zheng-Tian, Masia-Roig, Hector, Monroy, Madeline, Padniuk, Mikhail, Palm, Christopher A., Park, Sun Yool, Paul, Karun V., Penaflor, Alexander, Peng, Xiang, Pospelov, Maxim, Preston, Rayshaun, Pustelny, Szymon, Scholtes, Theo, Segura, Perrin C., Semertzidis, Yannis K., Sheng, Dong, Shin, Yun Chang, Smiga, Joseph A., Stalnaker, Jason E., Sulai, Ibrahim, Tandon, Dhruv, Wang, Tao, Weis, Antoine, Wickenbrock, Arne, Wilson, Tatum, Wu, Teng, Wurm, David, Xiao, Wei, Yang, Yucheng, Yu, Dongrui, Zhang, Jianwei“…The analysis of these data from a continuous month-long operation of GNOME finds no statistically significant signals, thus placing experimental constraints on such dark matter scenarios.…”
Publicado 2021
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19por Rocha, Joaquim“…With over 10 years of experience, Joaquim has worked in projects of different sizes and technologies, mostly involving the GNU/Linux operating system and other important Open Source projects such as GNOME.</p> <p>Apart from coding, he has also participated as speaker at a number of important conferences related to Free Software, like FOSDEM or GUADEC.…”
Publicado 2018
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20“…Here we reported the first complete chloroplast gnome sequences of C. wilsonii, which is 159,999 bp in total length with the large single copy (LSC) region of 87,868 bp, the small single copy (SSC) region of 19,335 bp, and two inverted repeat (IR) regions of 26,399 bp. …”
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