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4581por Cornes, Eric, Porta-De-La-Riva, Montserrat, Aristizábal-Corrales, David, Brokate-Llanos, Ana María, García-Rodríguez, Francisco Javier, Ertl, Iris, Díaz, Mònica, Fontrodona, Laura, Reis, Kadri, Johnsen, Robert, Baillie, David, Muñoz, Manuel J., Sarov, Mihail, Dupuy, Denis, Cerón, Julián“…These proteins have been described as forming homo- or heterocomplexes implicated in a broad range of RNA-related functions. …”
Publicado 2015
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4582“…In this study, we investigated the effects of taxonomic structures on co-inheritance analysis using 2,144 reference species in four query species: Escherichia coli, Saccharomyces cerevisiae, Arabidopsis thaliana, and Homo sapiens. We observed three clusters of reference species based on a principal component analysis of the phylogenetic profiles, which correspond to the three domains of life—Archaea, Bacteria, and Eukaryota—suggesting that pathways inherit primarily within specific domains or lower-ranked taxonomic groups during speciation. …”
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4583por Helliwell, Stephen B., Karkare, Shantanu, Bergdoll, Marc, Rahier, Alain, Leighton-Davis, Juliet R., Fioretto, Celine, Aust, Thomas, Filipuzzi, Ireos, Frederiksen, Mathias, Gounarides, John, Hoepfner, Dominic, Hofmann, Andreas, Imbert, Pierre-Eloi, Jeker, Rolf, Knochenmuss, Richard, Krastel, Philipp, Margerit, Anais, Memmert, Klaus, Miault, Charlotte V., Rao Movva, N., Muller, Alban, Naegeli, Hans-Ulrich, Oberer, Lukas, Prindle, Vivian, Riedl, Ralph, Schuierer, Sven, Sexton, Jessica A., Tao, Jianshi, Wagner, Trixie, Yin, Hong, Zhang, Juan, Roggo, Silvio, Reinker, Stefan, Parker, Christian N.“…Here we show that FR171456 specifically targets the sterol-4-alpha-carboxylate-3-dehydrogenase (Saccharomyces cerevisiae—Erg26p, Homo sapiens—NSDHL (NAD(P) dependent steroid dehydrogenase-like)), an essential enzyme in the ergosterol/cholesterol biosynthesis pathway. …”
Publicado 2015
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4584por Kasai, Hirotake, Kawakami, Kunihiro, Yokoe, Hiromasa, Yoshimura, Kentaro, Matsuda, Masanori, Yasumoto, Jun, Maekawa, Shinya, Yamashita, Atsuya, Tanaka, Tomohisa, Ikeda, Masanori, Kato, Nobuyuki, Okamoto, Toru, Matsuura, Yoshiharu, Sakamoto, Naoya, Enomoto, Nobuyuki, Takeda, Sen, Fujii, Hideki, Tsubuki, Masayoshi, Kusunoki, Masami, Moriishi, Kohji“…A treatment with the FKBP8 inhibitor N-(N′, N′-dimethylcarboxamidomethyl)cycloheximide impaired the formation of a homo- or hetero-complex consisting of FKBP6 and/or FKBP8, and suppressed HCV replication. …”
Publicado 2015
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4585por Kopp, Gisela H, Fischer, Julia, Patzelt, Annika, Roos, Christian, Zinner, Dietmar“…In conjunction with their multilevel social organization, this finding parallels the observations for human hunter-gatherers and strengthens baboons as an intriguing model to elucidate the processes that shaped the highly cooperative societies of Homo. Am. J. Primatol. 77:878–889, 2015. © 2015 The Authors. …”
Publicado 2015
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4586“…In comparative benchmarks using representative datasets of homo- and hetero-complexes, we show that eRank(PPI) consistently outperforms state-of-the-art algorithms improving the success rate by ~10 %. …”
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4587por Grugni, Viola, Battaglia, Vincenza, Perego, Ugo Alessandro, Raveane, Alessandro, Lancioni, Hovirag, Olivieri, Anna, Ferretti, Luca, Woodward, Scott R., Pascale, Juan Miguel, Cooke, Richard, Myres, Natalie, Motta, Jorge, Torroni, Antonio, Achilli, Alessandro, Semino, Ornella“…Geologically, Panama belongs to the Central American land-bridge between North and South America crossed by Homo sapiens >14 ka ago. Archaeologically, it belongs to a wider Isthmo-Colombian Area. …”
Publicado 2015
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4588por Paula, Francisco Danilo Ferreira, Elói-Santos, Silvana Maria, Xavier, Sandra Guerra, Ganazza, Mônica Aparecida, Jotta, Patricia Yoshioka, Yunes, José Andrés, Viana, Marcos Borato, Assumpção, Juliana Godoy“…OBJECTIVE: The aim of this study was to analyze minimal residual disease using immunoglobulin (Ig) and T-cell receptor (TCR) gene rearrangements by conventional polymerase chain reaction followed by homo-heteroduplex analysis and to compare this with real-time polymerase chain reaction at the end of the induction period in children with acute lymphoblastic leukemia. …”
Publicado 2015
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4589por Lee, Gibok, Won, Hyung-Sik, Lee, Yoon-Mi, Choi, Jae-Wan, Oh, Taek-In, Jang, Jeong-Hwa, Choi, Dong-Kug, Lim, Beong-Ou, Kim, Young Jun, Park, Jong-Wan, Puigserver, Pere, Lim, Ji-Hong“…Here, we identified disulfide bond-mediated PHD2 homo-dimer formation in response to oxidative stress caused by oxidizing agents and oncogenic H-ras(V12) signalling. …”
Publicado 2016
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4590“…METHODS: We took the whole proteome sequence data of 42 strains of S. enterica and Homo sapiens along with KEGG-annotated metabolic pathway data, clustered proteins sequences using CD-HIT, identified essential genes using DEG database and discarded S. enterica homologs of human proteins in unique metabolic pathways (UMPs) and characterized hypothetical proteins with SVM-prot and InterProScan. …”
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4591por Elshaghabee, Fouad M. F., Bockelmann, Wilhelm, Meske, Diana, de Vrese, Michael, Walte, Hans-Georg, Schrezenmeir, Juergen, Heller, Knut J.“…These results indicate that microorganisms like W. confusa, a hetero-fermentative, mannitol-dehydrogenase negative lactic acid bacterium, may promote NAFLD through ethanol produced from sugar fermentation, while other intestinal bacteria and homo- and hetero-fermentative but mannitol-dehydrogenase positive lactic acid bacteria may not promote NAFLD. …”
Publicado 2016
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4592por Battistuzzi, Fabia U., Schneider, Kristan A., Spencer, Matthew K., Fisher, David, Chaudhry, Sophia, Escalante, Ananias A.“…Sets of LCRs are heterogeneous aggregates of regions that include homo- and heteropolymers and, as such, evolve according to different mechanisms. …”
Publicado 2016
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4593“…Analysis of frequently mutated cancer genes within this network revealed that tumor-suppressors, but not oncogenes, are significantly enriched with functional mutations in homo-oligomerization regions (Odds Ratio 3.68, P-Value < 10(−8)). …”
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4594“…Transactivation assays in yeast revealed the transcriptional activation potential of full-length OsHOX22 and OsHOX24 proteins. Homo- and hetero-dimerization capabilities of these proteins have also been demonstrated. …”
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4595“…The peptide sequences were searched against the reviewed homo sapiens database (www.uniprot.org) and the quantitation of protein variation was achieved through Progenesis LC-MS software (V4.0, Nonlinear Dynamics). …”
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4596por Rieger, Alexandra, Kemter, Elisabeth, Kumar, Sudhir, Popper, Bastian, Aigner, Bernhard, Wolf, Eckhard, Wanke, Rüdiger, Blutke, Andreas“…The present study used functional, as well as qualitative and quantitative morphological analyses to characterize the renal phenotype of juvenile (12 days) and aged (60 weeks) homo- and heterozygous Pou3f3(L423P) mutant mice and age-matched wild-type controls. …”
Publicado 2016
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4597“…Stiochiomertic expression of members of the CEA family (CEACAM1, 5, 6, 7) on epithelia maintains normal tissue architecture through homo-and hetero-philic interactions. Dysregulated over-expression of CEACAM6 is oncogenic, is associated with anoikis resistance and an invasive phenotype mediated by excessive TGFβ, AKT, FAK and SRC signaling in human malignancies. …”
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4598“…Conventional mutagenesis is not expected to confer reduction in lignin content in sugarcane due to its high polyploidy (x = 10–13) and functional redundancy among homo(eo)logs. Here we deploy transcription activator-like effector nuclease (TALEN) to induce mutations in a highly conserved region of the caffeic acid O-methyltransferase (COMT) of sugarcane. …”
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4599por Schulte, Tim, Mikaelsson, Cecilia, Beaussart, Audrey, Kikhney, Alexey, Deshmukh, Maya, Wolniak, Sebastian, Pathak, Anuj, Ebel, Christine, Löfling, Jonas, Fogolari, Federico, Henriques-Normark, Birgitta, Dufrêne, Yves F., Svergun, Dmitri, Nygren, Per-Åke, Achour, Adnane“…Crystal structure analyses revealed the formation of BR(187–385) homo-dimers via an intermolecular β-sheet, resulting in a positively charged concave surface, shaped to accommodate the acidic helical DNA structure. …”
Publicado 2016
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4600por Pougnet, Johan-Till, Compans, Benjamin, Martinez, Audrey, Choquet, Daniel, Hosy, Eric, Boué-Grabot, Eric“…ATP- and lNMDA-induced depression in the CA1 region of the hippocampus are additive, suggesting distinct molecular pathways. AMPARs are homo-or hetero-tetramers composed of GluA1-A4. Here, we first show that P2X2-mediated AMPAR inhibition is dependent on the subunit composition of AMPAR. …”
Publicado 2016
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