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3081“…Through attractor and Kyoto Encyclopedia of Genes and Genomes functional analysis, 277 enriched pathways were identified as attractors. …”
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3082“…The Gene Ontology (GO) enrichment and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis were performed by KOBAS 3.0. …”
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3083“…Therefore, we performed transcriptome analysis to investigate the enriched pathways associated with pathophysiology of the brain after SCI using Database for Annotation Visualization, and Integrated Discovery (DAVID), which yielded Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway. …”
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3084“…Gene Ontology (GO) enrichment analysis, Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis, protein–protein interaction (PPI) networks, and gene coexpression analysis were performed. …”
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3085por Zhong, Tao, Hu, Jiangtao, Xiao, Ping, Zhan, Siyuan, Wang, Linjie, Guo, Jiazhong, Li, Li, Zhang, Hongping, Niu, Lili“…Bioinformatics analysis annotated the 42 differentially expressed miRNAs and the top 10 most highly expressed miRNAs of the two libraries to 48 and 38 gene ontology categories, as well as to 168 and 71 Kyoto Encyclopedia of Genes and Genomes pathways, respectively. …”
Publicado 2017
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3086por Zhao, Rui, Wang, Yao, Zhang, Muchun, Gu, Xinquan, Wang, Weihua, Tan, Jiufeng, Wei, Xin, Jin, Ning“…Pathway enrichment analysis of DEGs was performed using Gene Ontology and the Kyoto Encyclopedia of Genes and Genomes. Furthermore, protein-protein interaction (PPI) networks of DEGs were constructed, on the basis of the Search Tool for the Retrieval of Interacting Genes/Proteins database. …”
Publicado 2017
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3087“…Results of Gene Ontology (GO) analyses showed that the 954 genes were involved in diverse terms of GO categories, such as positive regulation of macroautophagy, epithelial cell maturation, and synaptic vesicle clustering. Moreover, results of Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses demonstrated that most of these target genes were enriched in various cancer-related pathways, including non-small cell lung cancer, Wnt signaling pathway, cell cycle, and p53 signaling pathway. …”
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3088por Nakayama, Takeo, Imanaka, Yuichi, Okuno, Yasushi, Kato, Genta, Kuroda, Tomohiro, Goto, Rei, Tanaka, Shiro, Tamura, Hiroshi, Fukuhara, Shunichi, Fukuma, Shingo, Muto, Manabu, Yanagita, Motoko, Yamamoto, Yosuke“…Cross-sectional and retrospective cohort studies were conducted using the NDB built by the Ministry of Health, Labor and Welfare of Japan, private health insurance claims databases, and the Kyoto University Hospital database (including related hospitals). …”
Publicado 2017
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3089“…Integrated bioinformatic analysis was used to clarify biological functions of the identified genes, including Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway, the construction of a protein–protein interaction network, transcription factor, and statistical analyses. …”
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3090por Huang, Yan, Wan, Jian, Guo, Yibing, Zhu, Shajun, Wang, Yao, Wang, Lei, Guo, Qingsong, Lu, Yuhua, Wang, Zhiwei“…We then focused on the differentially expressed genes (DEGs) during the time course of the differentiation period, and these genes underwent Gene Ontology annotation and Kyoto Encyclopedia of Genes and Genomes pathway analysis. …”
Publicado 2017
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3091por Liu, Cuiying, Zhang, Chencheng, Yang, Jian, Geng, Xiaokun, Du, Huishan, Ji, Xunming, Zhao, Heng“…After predicting their target genes, the Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Ontology (GO) analyses were further used to predict the associated significant cell signaling pathways and functions. …”
Publicado 2017
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3092por Zhu, Haisheng, Liu, Jianting, Wen, Qingfang, Chen, Mindong, Wang, Bin, Zhang, Qianrong, Xue, Zhuzheng“…Additionally, 20,546 and 13,021 Unigenes were similar to existing sequences in the Eukaryotic Orthologous Groups of proteins and Kyoto Encyclopedia of Genes and Genomes databases, respectively. …”
Publicado 2017
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3093por Chen, Shuo, Wang, Yan, Zhang, Lin, Su, Yinan, Zhang, Mingqing, Wang, Juan, Zhang, Xipeng“…The Database for Annotation, Visualization and Integrated Discovery was used to perform Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis of the DEGs. …”
Publicado 2017
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3094por Inoue, Ryo, Ohue-Kitano, Ryuji, Tsukahara, Takamitsu, Tanaka, Masashi, Masuda, Shinya, Inoue, Takayuki, Yamakage, Hajime, Kusakabe, Toru, Hasegawa, Koji, Shimatsu, Akira, Satoh-Asahara, Noriko“…We measured the parameters of glucose metabolism, gut bacterial taxonomy and functional profile, and examined the associations in a cross-sectional manner. Eleven of 288 “Kyoto Encyclopedia of Genes and Genomes” pathways were significantly enriched in diabetic patients compared with control subjects (p<0.05, q<0.1). …”
Publicado 2017
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3095“…The pathways were also significantly enriched in the Kyoto Encyclopedia of Genes and Genomes analysis, and most were cancer-related, including the mitogen-activated protein kinase signaling pathway, pathways involved in cancer, the Wnt signaling pathway, the Hippo signaling pathway, proteoglycans involved in cancer and axon guidance. …”
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3096por Qi, Bo, Wang, Yan, Chen, Zhi-Jun, Li, Xiang-Nan, Qi, Yu, Yang, Yang, Cui, Guang-Hui, Guo, Hai-Zhou, Li, Wei-Hao, Zhao, Song“…Both in vitro and in vivo assays were used to investigate the effects of miR-30a-3p/5p on ESCC cell proliferation. Furthermore, Kyoto Encyclopedia of Genes and Genomes analysis was performed to explore underlying mechanisms involved in ESCC, and then, assays were carried out to verify the potential molecular mechanism of miR-30a in ESCC. …”
Publicado 2017
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3097por Jaworska, Kinga, Huc, Tomasz, Samborowska, Emilia, Dobrowolski, Leszek, Bielinska, Klaudia, Gawlak, Maciej, Ufnal, Marcin“…We did experiments on male, 24-26-week-old normotensive Wistar-Kyoto rats (WKY), spontaneously hypertensive rats (SHR) and SHR treated with enalapril, an antihypertensive drug (SHR-E). …”
Publicado 2017
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3098“…Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes pathway (KEGG) enrichment analyses were performed; Cytoscape software was used for the protein-protein interaction (PPI) network and module analysis of the DEGs. …”
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3099por Singh, Jasleen K., Barsegyan, Varderes, Bassi, Nikhil, Marszalec, William, Tai, Shannon, Mothkur, Shruthi, Mulla, Maaz, Nico, Elsa, Shiferaw, Yohannes, Aistrup, Gary L., Wasserstrom, John Andrew“…Confocal imaging was used to measure Ca(2+) transients and 2‐D z‐stack images in left ventricular epicardial myocytes of intact hearts from spontaneously hypertensive rats (SHR) and Wistar‐Kyoto control rats. TT organization was measured as the organizational index (OI) derived from a fast Fourier transform of TT organization. …”
Publicado 2017
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3100“…BLAST2GO helped in localization of predicted targets and KEGG (Kyoto Encyclopedia for Genes and Genomes) pathway analysis concluded that miR9662, miR894, miR172, and miR166 might be involved in regulating saponin biosynthetic pathway. …”
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