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521por You, Xu, Zhang, Yunqiao, Long, Qing, Liu, Zijun, Feng, Ziqiao, Zhang, Wengyu, Teng, Zhaowei, Zeng, Yong“…Functional annotation and pathway enrichment analysis of DEGs were performed by using Gene ontology and Kyoto Encyclopedia of Genes and Genomes analyses, respectively. …”
Publicado 2020
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522por Li, Chuan, Xiong, Ting, Zhou, Mingfang, Wan, Lei, Xi, Suwang, Liu, Qiuhong, Chen, Yi, Mao, Huirong, Liu, Sanfeng, Chen, Biao“…We also predicted the target genes of the differentially expressed miRNAs and subsequently analyzed the enriched gene ontology (GO) terms and Kyoto Encyclopedia of Genes and Genomes (KEGG) signaling pathways, and finally constructed a protein–protein interaction (PPI) network with the target genes. …”
Publicado 2020
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523por Fujii, Kota, Sakanaka, Katsuyuki, Uozumi, Ryuji, Ishida, Yuichi, Inoo, Hiroyuki, Tsunoda, Shigeru, Miyamoto, Shin’ich, Muto, Manabu, Mizowaki, Takashi“…DESIGN, SETTING, AND PARTICIPANTS: This retrospective cohort study included patients with clinical stages I to III thoracic esophageal cancer who visited the Kyoto University Hospital, Kyoto, Japan, from January 1, 2007, to December 31, 2013. …”
Publicado 2020
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524“…We constructed a protein-protein interaction network, and used enrichment analysis of the Kyoto Encyclopedia of Genes and Genomes to screen for important genes. …”
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525por Sun, Jiaxue, Chen, Fengrong, Chen, Cheng, Zhang, Zherui, Zhang, Zunyue, Tian, Weiwei, Yu, Juehua, Wang, Kunhua“…The expression profiles of intestinal tissue samples were analyzed and their expression profiles were integrated to obtain the differentially expressed genes and analyzed using bioinformatics. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses of the differentially expressed genes were performed using Metascape. …”
Publicado 2020
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526por Chen, Ru, Wu, Juan, Lu, Chang, Yan, Ting, Qian, Yu, Shen, Huiqing, Zhao, Yujing, Wang, Jianzhen, Kong, Pengzhou, Zhang, Xinri“…CA inhibited tumor growth in vivo. Gene ontology and Kyoto Encyclopedia of Genes and Genomes analysis revealed that these differentially expressed mRNAs were potentially implicated in the CA-suppressing malignant phenotypes of NSCLC. …”
Publicado 2021
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527por Guo, Donggeng, Lv, Jinhan, Chen, Xi, Yan, Xiaoxu, Ma, Fenglian, Liu, Yuanyuan, Chen, Xu, Xie, Jing, Zhang, Mingzhu, Jin, Zheyu, Cai, Lijun, Sun, Xichun, Niu, Dongsheng, Duan, Dayue D“…The interactome of these DEmiRs in RA pathogenesis were further characterized with gene ontology and Kyoto Encyclopaedia of Genes and Genomes. RESULTS: Three upregulated DEmiRs (hsa-miR-187-5p, -4532, -4516) and eight downregulated DEmiRs (hsa-miR-125a-3p, -575, -191-3p, -6865-3p, -197-3p, -6886-3p, -1237-3p, -4436b-5p) were identified in NARAPs. …”
Publicado 2020
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528por Lin, Xinghua, Zhou, Dayan, Zhang, Xiaomin, Li, Guangli, Zhang, Yulei, Huang, Cailin, Zhang, Zhixin, Tian, Changxu“…The regulatory networks of sex-related pathways were explored through Gene Ontology (GO), Kyoto Encyclopedia of Gene and Genome (KEGG) pathway enrichment, and bioinformatics analyses. …”
Publicado 2021
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529por GAO, HAO-EN, LI, FANG-HUI, XIE, TIAN, MA, SONG, QIAO, YI-BO, WU, DA-SHUAI, SUN, LEI“…Age skeletal muscles were then subjected to quantitative reverse transcription–polymerase chain reaction, Kyoto Encyclopedia of Genes and Genomes, immunoblotting, and miR-486 3′ untranslated region luciferase reporter gene analyses. …”
Publicado 2021
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530“…Gene ontology(GO) enrichment analysis showed that the crotonylated proteins were significantly enriched in the platelet alpha granule lumen, platelet degradulation, and cell adhesion molecule binding. In addition, Kyoto Encyclopedia of Genes and Genomes (KEGG)-based functional enrichment analysis in the Kyoto encyclopedia showed that crotonylated protein was enriched in CD36, which is closely linked to renal failure. …”
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531por An, Yang, Wang, Yuanlin, Xu, Guoyong, Liao, Yinan, Huang, Ge, Jin, Xin, Xie, Chengxin, Li, Qinglong, Yin, Dong“…The Hub gene is selected from the genes in DEGs that coexist in the top 30 Degree and the Kyoto Encyclopedia of Genes and Genomes pathway. …”
Publicado 2021
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532por Furuse, Motomasa, Kawabata, Shinji, Wanibuchi, Masahiko, Shiba, Hiroyuki, Takeuchi, Koji, Kondo, Natsuko, Tanaka, Hiroki, Sakurai, Yoshinori, Suzuki, Minoru, Ono, Koji, Miyatake, Shin-Ichi“…BNCT was performed using Kyoto University Research Reactor as a neutron source. …”
Publicado 2021
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533por Zhang, Xiaojuan, Cui, Yuqing, Ding, Xianfei, Liu, Shaohua, Han, Bing, Duan, Xiaoguang, Zhang, Haibo, Sun, Tongwen“…Then, Gene Ontology (GO), KEGG (Kyoto Encyclopedia of Genes and Genomes) pathway, mRNA‑lncRNA and mRNA‑lncRNA-pathway co-expression network analysis was conducted in selected significant module. …”
Publicado 2021
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534“…The Gene Ontology and Kyoto Encyclopedia of Genes and Genomes were used for pathway enrichment analysis. …”
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535por Pang, Tingting, Liu, Chang, Yao, Junjie, Li, Jiahui, Li, Zhongxu, Lou, Huijuan, Lei, Siyuan, Zhang, Jiangchun, Dong, Li, Wang, Yufeng“…At the same time, the intersecting targets were imported into the Search Tool for the Retrieval of Interaction Gene/Proteins database to build a protein-protein interaction network and to screen the core targets; the intersecting targets were visualized by using the Database for Annotation, Visualization and Integrated Discovery 6.8 database for gene ontology functional analysis and the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis, and construct the “active ingredient-target-pathway” network. …”
Publicado 2022
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536por Huang, Xing, Feng, Yipeng, Ma, Dawei, Ding, Hanlin, Dong, Gaochao, Chen, Yan, Huang, Xiaochen, Zhang, Jingyuan, Xu, Xinyu, Chen, Chen“…The results indicated that gene expression changed dramatically, specifically at the intraductal papillary-mucinous adenoma (IPMA) stage. Gene ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and Kyoto Encyclopedia of Genes and Genomes (GSEA) pathway analyses showed that glycoprotein-related, cell cycle, and P53 pathways displayed the most significant changes during progression. …”
Publicado 2022
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537por Yamamoto, Yoshihiro, Fukuyama, Keita, Kanai, Masashi, Kondo, Tomohiro, Yoshioka, Masahiro, Kou, Tadayuki, Quy, Pham Nguyen, Kimura-Tsuchiya, Reiko, Yamada, Takahiro, Matsumoto, Shigemi, Kosugi, Shinji, Muto, Manabu“…To verify the origin of pathogenic variants reported in ctDNA testing, germline sequencing was performed using peripheral blood DNA samples archived in the Clinical Bioresource Center in Kyoto University Hospital (Kyoto, Japan) under clinical research settings. …”
Publicado 2022
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538por He, Sheng, He, Lili, Yan, Fangran, Li, Junda, Liao, Xiaoting, Ling, Maoyao, Jing, Ren, Pan, Linghui“…Gene Ontology (GO) and Kyoto Encyclopedia of Genomes (KEGG) and gene set enrichment analysis (GSEA) were performed using the differentially expressed genes. …”
Publicado 2022
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539“…The hub targets were transmitted to Database for Annotation, Visualization and Integrated Discovery for gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis. …”
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540por Li, Ming-han, Jin, Ming-hui, Hu, Rui-yi, Tang, Shan, Li, Ke-ke, Gong, Xiao-Jie, Sun, Yin-shi, Wang, Ying-ping, Wang, Zi, Li, Wei“…PPI networks of the genes were constructed using STRING, and the core targets were screened out through topological analysis. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes enrichment analyses were performed by using the R language. …”
Publicado 2023
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