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8481“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses were executed for the promoter genes. …”
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8482por Wang, Fengyan, Yang, Kun, Pan, Runsang, Xiang, Yang, Xiong, Zhilin, Li, Pinhao, Li, Ke, Sun, Hong“…Functional analyses including Gene Ontology (GO), kyoto encyclopedia of genes and genomes analyses (KEGG), gene set enrichment analysis, single-sample gene set enrichment analysis (ssGSEA), and competing endogenous RNA (ceRNA) network, were used to explore the molecular mechanisms of OS and the correlation between immune infiltration and gene signature. …”
Publicado 2023
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8483por Wu, Ji, Qin, Chengjian, Fang, Guoxing, Shen, Lei, Li, Muhua, Lu, Bimin, Li, Yanghong, Yao, Xiaomin, Fang, Dalang“…METHODS: Sequencing data of ACP was downloaded from the comprehensive gene expression database for differentially expressed gene identification and visualized by Gene Ontology, Kyoto Gene, and gene set enrichment analyses (GSEAs). …”
Publicado 2023
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8484por Jin, Xin, Ackah, Michael, Wang, Lei, Amoako, Frank Kwarteng, Shi, Yisu, Essoh, Lionnelle Gyllye, Li, Jianbin, Zhang, Qiaonan, Li, Haonan, Zhao, Weiguo“…The mulberry plant’s response to the application of Mg used metabolites, mainly amino acids, organic acids, fatty acyls, flavonoids and prenol lipids, in the KEGG (Kyoto Encyclopedia of Genes and Genomes) pathways. …”
Publicado 2023
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8485por Li, Xuemei, Teng, Teng, Yan, Wei, Fan, Li, Liu, Xueer, Clarke, Gerard, Zhu, Dan, Jiang, Yuanliang, Xiang, Yajie, Yu, Ying, Zhang, Yuqing, Yin, Bangmin, Lu, Lin, Zhou, Xinyu, Xie, Peng“…Ingenuity Pathways Analysis (IPA) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis identified differentially regulated canonical pathways, and then we presented a schematic model that simulates AKT and MAPK signaling pathways network and their interactions and revealed the cascade reactions. …”
Publicado 2023
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8486por Hu, Minhua, Yan, Hongsong, Li, Haishan, Feng, Yuanlan, Sun, Weipeng, Ren, Yueyi, Ma, Luyao, Zeng, Wenxing, Huang, Feng, Jiang, Ziwei, Dong, Hang“…Furthermore, Gene Ontology enrichment and Kyoto Encyclopedia of Genes and Genomes pathway analyses were performed for common targets among curcuma targets and OS-related targets using the DAVID database. …”
Publicado 2023
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8487por Zhang, Yuxin, Zhang, Jiahui, Sun, Zhongyi, Wang, Hui, Ning, Ruonan, Xu, Longyu, Zhao, Yichen, Yang, Kai, Xi, Xiaobing, Tian, Jiwei“…Subsequently, differentially expressed genes (DEGs) analysis, Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis, gene ontology (GO), and gene set enrichment analysis (GSEA) were performed to explore the biological functions of DEGs. …”
Publicado 2023
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8488por Ni, Yaojun, Zhang, Wenhao, Mu, Guang, Gu, Yan, Wang, Hongchang, Wei, Ke, Xia, Yang, Xie, Xueying, Ge, Qinyu, Tan, Tan, Wang, Jun“…The Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) terms of the differentially expressed transcripts of NSCLC included oxidative phosphorylation, proton transmembrane transport, and the response to oxidative stress. …”
Publicado 2023
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8489por Zhang, Juhong, Ma, Haizhu, Yang, Guijun, Ke, Jing, Sun, Wenfang, Yang, Li, Kuang, Shaojing, Li, Hai, Yuan, Wei“…Gene ontology (GO) functional annotation analysis revealed that target genes in the top 20 terms were mainly related to “protein binding,” “metal ion binding,” “ATP binding,” and “intracellular signal transduction.” Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis revealed that these target genes were functionally enriched in the “Ras,” “Hippo,” “cGMP-PKG,” and “AMPK signaling pathways.” …”
Publicado 2023
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8490por Ge, Gai, Shang, Jingzhe, Gan, Tian, Chen, Zhiming, Pan, Chun, Mei, Youming, Long, Siyu, Wu, Aiping, Wang, Hongsheng“…Moreover, the biological mechanism of Ps and leprosy was explored by Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis, Gene Ontology (GO) analysis, Gene Set Enrichment Analysis analysis, and protein–protein interaction (PPI) analyses. …”
Publicado 2023
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8491por Mori, Tsukasa, Machida, Kazumasa, Kudou, Yuki, Kimishima, Masaya, Sassa, Kaito, Goto-Inoue, Naoko, Minei, Ryuhei, Ogura, Atsushi, Kobayashi, Yui, Kamiya, Kentaro, Nakaya, Daiki, Yamamoto, Naoyuki, Kashiwagi, Akihiko, Kashiwagi, Keiko“…Therefore, RNA-seq, metabolomic, Ingenuity Pathway Analysis, and Kyoto Encyclopedia of Genes and Genomes analyses were performed on the entire brain to investigate physiological changes in the brain, finding that glycolysis-driven ATP production was enhanced and ß-oxidation and the tricarboxylic acid cycle were downregulated in response to predation stress. …”
Publicado 2023
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8492“…The DEGs were subjected to Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway analyses. …”
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8493por Hao, Song, Xinqi, Mao, Weicheng, Xu, Shiwei, Yang, Lumin, Cao, Xiao, Wang, Dong, Liu, Jun, Hua“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses of DIRGs function were performed. …”
Publicado 2023
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8494“…The Gene Ontology (GO)-enriched processes and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways of the core targets were analyzed by the KOBAS-I database and Sangerbox. …”
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8495“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis are conducted to show the core tumor mechanism and biological process. …”
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8496por Yang, Yue, Zhao, Tiantian, Wang, Fengmin, Liu, Luping, Liu, Bingqiang, Zhang, Kai, Qin, Jun, Yang, Chunyan, Qiao, Yake“…Upon further investigation using Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis, we validated the previous findings that two candidate genes (CHS3C and CHS4A) reside within the qSCC08 region and identified a new QTL, qSCC02. …”
Publicado 2023
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8497por Niu, Fuan, Liu, Mingyu, Dong, Shiqing, Dong, Xianxin, Wang, Ying, Cheng, Can, Chu, Huangwei, Hu, Zejun, Ma, Fuying, Yan, Peiwen, Lan, Dengyong, Zhang, Jianming, Zhou, Jihua, Sun, Bin, Zhang, Anpeng, Hu, Jian, Zhang, Xinwei, He, Shicong, Cui, Jinhao, Yuan, Xinyu, Yang, Jinshui, Cao, Liming, Luo, Xiaojin“…Gene Ontogeny (GO) enrichment analysis showed that the 63 DEGs were mainly enriched in eight GO terms, including auxin-activated signaling pathway, auxin polar transport, auxin transport, basipetal auxin transport, and amino acid transmembrane transport, most of which were directly or indirectly related to polar auxin transport. Kyoto Encyclopedia of Genes and Genomes (KEGG) metabolic pathway analysis further verified that the down-regulated genes related to polar auxin transport had important effects on increased SNP. …”
Publicado 2023
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8498por Qiu, Xin-Tong, Guo, Chen, Ma, Li-Tian, Li, Xin-Ning, Zhang, Qi-Yan, Huang, Fen-Sheng, Zhang, Ming-Ming, Bai, Yang, Liang, Guo-Biao, Li, Yun-Qing“…While Gene Ontology and Kyoto Encyclopedia of Genes and Genomes enrichment analyses of the DEGs suggested that most of the altered genes were involved in synaptic transmission and plasticity, bioinformatics analysis of the DEPs revealed novel critical pathways associated with autophagy, mitophagy, and peroxisome. …”
Publicado 2023
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8499por Xing, Jinshan, Luo, Xin, Jia, Keran, Liu, Shuang, Chen, Shaokun, Qiao, Gan, Zhang, Chunxiang, Yi, Jingyan“…RESULTS: Network pharmacology identified 9 major active ingredients of ASP with 73 therapeutic targets for PCOS. Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment yielded 101 PCOS-related signaling pathways. …”
Publicado 2023
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8500por Yu, Xia, He, Li, Lin, Wenyi, Zheng, Xuemei, Zhang, Ling, Yu, Bo, Wang, Yanjun, Yang, Zhenglin, Lin, Yonghong“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses of DEGs and DEMs were performed. …”
Publicado 2023
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