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8921por Ma, Junpeng, Chen, Wei, Wang, Ke, Tian, Kaibing, Li, Qi, Zhao, Tianna, Zhang, Liwei, Wang, Liang, Wu, Zhen, Zhang, Junting“…Whole-transcriptome sequencing, Gene Set Enrichment Analysis, Gene Ontology analysis, Kyoto Encyclopedia of Genes and Genomes analysis and competing endogenous RNA (ceRNA) analysis were conducted. …”
Publicado 2019
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8922“…We performed gene annotation (molecular function [MF], biological process [BP], cellular component [CC]), and determined the functional pathways Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway for the DEGs. …”
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8923“…In this study, we used Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genome (KEGG) pathway enrichment analyses to determine the pathways affected by miR‐129‐1‐3p expression. …”
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8924“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses were performed to elucidate the possible functions of these differentially expressed circRNAs. …”
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8925“…We conducted functional enrichment analysis of Gene Ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway and extracted hub genes from the protein–protein interaction network. …”
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8926por Li, Wenhui, Xu, Ming, Li, Yu, Huang, Ziwei, Zhou, Jun, Zhao, Qiuyang, Le, Kehao, Dong, Fang, Wan, Cheng, Yi, Pengfei“…The relationship between glycolysis activity and immune/inflammation function was studied by using the differential genes expression analysis, gene ontology (GO) analysis, Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis, gene set enrichment analyses (GSEA) and correlation analysis. …”
Publicado 2020
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8927por Ding, Yudi, Qi, Nana, Wang, Ke, Huang, Yiming, Liao, Jinling, Wang, Hongxue, Tan, Aihua, Liu, Lihua, Zhang, Zhenqiang, Li, Jinlong, Kong, Jinliang, Qin, Shouming, Jiang, Yonghua“…Most of these genes were related to lung cancer, such as laminin γ2, thrombospondin 1, nerve growth factor inducible, integrin alpha11, and proprotein convertase subtilisin/kexin type 9. Gene ontology and Kyoto Encyclopedia of Genes and Genomes analyses suggested that these genes are fundamental to cancer development processes, such as cell migration and extracellular matrix organization. …”
Publicado 2020
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8928por Li, Hua, Han, Mingzheng, Yu, Lujia, Wang, Sifan, Zhang, Jie, Tian, Ji, Yao, Yuncong“…The crabapple (Malus) provides an excellent model to study PA biosynthesis and metabolism; therefore, to gain insights into the PA regulatory network in Malus plants, we performed RNA-seq profiling of fruits of the ‘Flame’ cultivar at five sequential developmental stages. KEGG (Kyoto Encyclopedia of Genes and Genomes) enrichment analysis showed that differentially expressed genes (DEGs) related to the functional category ‘plant hormone signal transduction’ were significantly enriched during fruit development. …”
Publicado 2020
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8929por Wang, Yuexia, Li, Xiaoyan, Liu, Nana, Wei, Shimei, Wang, Jianan, Qin, Fujun, Suo, Biao“…The Gene Ontology (GO) annotation and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis results suggested that the ALA pretreatment adjusted some biological pathways, such as metabolic pathways and pathways involved in photosynthesis and ribosomes, to enhance the drought resistance of chloroplasts. …”
Publicado 2020
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8930por Zhao, Liang, Sun, Lifang, Zheng, Xiuli, Liu, Jingfang, Zheng, Rong, Yang, Rui, Wang, Ying“…Differentially expressed genes were analyzed using Search Tool for the Retrieval of Interacting Genes, and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis was conducted. …”
Publicado 2020
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8931por Geng, Chao, Li, Yahong, Guo, Fang, Wang, Jindan, Yue, Yiyun, Zhou, Kewen, Wei, Ruihua, Zhang, Yan“…Last, Gene Ontology (GO) functional enrichment analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis were performed on the colocated mRNAs of the differentially expressed lncRNAs. …”
Publicado 2020
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8932Screening and identification of MicroRNAs expressed in perirenal adipose tissue during rabbit growthpor Wang, Guoze, Guo, Guo, Tian, Xueting, Hu, Shenqiang, Du, Kun, Zhang, Qinghai, Mao, Jingxin, Jia, Xianbo, Chen, Shiyi, Wang, Jie, Lai, Songjia“…To explore the functions of identified miRNAs, Gene Ontology (GO) enrichment and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses were performed. …”
Publicado 2020
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8933“…The TOAST graphical user interface allows for quick comparisons between plant spaceflight experiments using real-time, gene-specific queries, or by using functional gene ontology, Kyoto Encyclopedia of Genes and Genomes pathway, or other filtering systems to explore genetic networks of interest. …”
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8934por Lu, Shuang, Zhu, Ni, Guo, Weiwei, Wang, Xin, Li, Kaiji, Yan, Jie, Jiang, Cuiping, Han, Shiyu, Xiang, Hanmin, Wu, Xiaohan, Liu, Yuanyuan, Xiong, Hairong, Chen, Liangjun, Gong, Zuojiong, Luo, Fan, Hou, Wei“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis demonstrated that the host genes of differentially expressed circRNAs were principally involved in the innate immune response, the type I interferon (IFN) signaling pathway, and the cytokine-mediated signaling pathway. …”
Publicado 2020
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8935por Guo, Dongmei, Wang, Hongchun, Sun, Li, Liu, Shuang, Du, Shujing, Qiao, Wenjing, Wang, Weiyan, Hou, Gang, Zhang, Kaigang, Li, Chunpu, Teng, Qingliang“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) functional enrichment analysis were performed on the modules deemed important. …”
Publicado 2020
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8936por Hou, Xinran, Weng, Yingqi, Guo, Qulian, Ding, Zhuofeng, Wang, Jian, Dai, Jiajia, Wei, Anqi, Song, Zongbin“…Then, we performed Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis on the expression of DEmRNAs and DElncRNAs, showing that they were mainly enriched in inflammatory and immunologic processes/pathways. …”
Publicado 2020
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8937por Li, Huijuan, Liu, Shibin, Yang, Xue, Du, Yongqian, Luo, Jiezhang, Tan, Jie, Sun, Yulong“…Differentially expressed genes (DEGs) were acquired, followed by Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes pathway (KEGG) and protein-protein interaction (PPI) analysis. …”
Publicado 2020
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8938por Guo, Qiang, Ke, Xi-xian, Liu, Zhou, Gao, Wei-Long, Fang, Shi-Xu, Chen, Cheng, Song, Yong-Xiang, Han, Hao, Lu, Hong-Ling, Xu, Gang“…Further, we performed gene ontology (GO) analysis, Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis, and gene set enrichment analysis (GSEA) to elucidate the potential mechanism underlying the role of STEAP1 in LUAD. …”
Publicado 2020
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8939“…Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway based approaches were used to investigate biological functions and signaling pathways affected by the differentially expressed mRNAs. …”
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8940“…In addition, GSEA analysis identified Kyoto Encyclopaedia of Genes and Genomes pathways for renal cell carcinoma, thyroid cancer and CRC involving ABCD3.…”
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