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881“…Subsequently, GO enrichment analysis and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis were conducted to elucidate the underlying mechanisms and roles from the perspective of overall pathways and cellular functions. …”
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882“…This study was approved by the Committee on Medical Ethics of Kyoto University and was conducted in accordance with the Code of Ethics of the World Medical Association. …”
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883“…Gene ontology (GO) and Kyoto Gene and Genome Encyclopedia (KEGG) pathway enrichment analysis of overlapping targets were performed using DAVID 6.8 online tool. …”
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884“…The RNA sequencing results enabled a prediction of the downstream genes by using the Kyoto Encyclopedia of Genes and Genomes (KEGG), Gene Ontology (GO), and MCODE analyses, and the findings showed that CXCL8 was significantly regulated by Siglec-15 and might be a promising downstream target gene of Siglec-15. …”
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885por Miralles-Pérez, Bernat, Nogués, Maria Rosa, Sánchez-Martos, Vanessa, Fortuño-Mar, Àngels, Ramos-Romero, Sara, Torres, Josep L., Ponomarenko, Julia, Amézqueta, Susana, Zhang, Xiang, Romeu, Marta“…Thirty-six male Wistar–Kyoto rats were divided into three dietary groups: standard diet, HF diet, and HF diet + Inulin diet. …”
Publicado 2022
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886“…Gene Ontology categories and Kyoto Encyclopedia of Genes and Genomes pathways enriched in the differentially expressed genes (DEGs) were analyzed by using clusterProfiler, org.Hs.eg.db, and Pathview, and protein–protein interaction (PPI) network was built by Cytoscape. …”
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887por Zhang, Yan, Liu, Zaixia, Yun, Xia, Batu, Baiyin, Yang, Zheng, Zhang, Xinlai, Zhang, Wenguang, Liu, Taodi“…Differently expressed genes (DEGs) were identified, and the features of DEGs were further analyzed with GO (Gene Ontology), KEGG (Kyoto Encyclopedia of Genes and Genomes) and Short Time-series Expression Miner (STEM). …”
Publicado 2023
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888por Tian, Yuqing, Liu, Shiying, Zhang, Yanan, Yang, Jiefu, Guo, Peiyao, Zhang, Hongchao, Yu, Xue, Zou, Tong“…In this paper, based on existing gene expression data in the Gene Expression Omnibus database, a detailed description of immune infiltration status in AF is presented using a series of analytical methods, including differential analysis, Gene Ontology categorization, Kyoto Encyclopedia of Genes and Genomes enrichment analysis, and weighted gene coexpression network analysis, and analysis tools such as CIBERSORTx and Cytoscape. …”
Publicado 2023
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889por Wang, Cuina, Lu, Yingcong, He, Keyi, Zhao, Ru, Cheng, Jianjun, Jiang, Shilong, Guo, Mingruo“…The total detected 624 proteins were principally allocated to cellular process of biological process (BP), cell and cell part of cell component (CC) and binding of molecular function (MF) according to Gene Ontology (GO) annotation; and carbohydrate metabolism of Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis. …”
Publicado 2023
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890“…Based on Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses, we predicted the biological functions of differentially expressed (DE) mRNAs. …”
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891“…Potato seedlings were infected with V. dahliae and incubated for 36 h, after which 181 proteins were found to be significantly upregulated. Gene ontology and Kyoto Encyclopedia of Genes and Genomes enrichment analyses showed that most of these proteins were involved in early growth and cell wall degradation. …”
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892por Shinohara, Koh, Murase, Kazunori, Tsuchido, Yasuhiro, Noguchi, Taro, Yukawa, Satomi, Yamamoto, Masaki, Matsumura, Yasufumi, Nakagawa, Ichiro, Nagao, Miki“…Incidence of Streptococcus dysgalactiae subspecies equisimilis (SDSE) bacteremia is increasing in the Kyoto-Shiga region of Japan. We retrospectively analyzed clinical features of SDSE bacteremia and conducted comparative genomic analyses of isolates collected from 146 bacteremia episodes among 133 patients during 2005–2021. …”
Publicado 2023
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893por Wang, Fang, Xu, Lili, Qi, Mingming, Lai, Huimin, Zeng, Fanhua, Liang, Furong, Wen, Qing, Ma, Xihua, Zhang, Chan, Xie, Kaili“…A total of 3,138 differential metabolites were screened, resulting in the identification of 124 differential metabolites. Kyoto encyclopedia of genes and genomes pathway analysis revealed that they were mainly enriched in the following metabolic pathways: central carbon metabolism in cancer; protein digestion and absorption; aminoacyl-transfer RNA biosynthesis; mineral absorption; alanine, aspartate, and glutamate metabolism; and prostate cancer. …”
Publicado 2023
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894por Li, Ying-Jie, Tang, Dong-Xin, Yan, Hong-Ting, Yang, Bing, Yang, Zhu, Long, Feng-Xi“…The core targets were imported into the DAVID 6.8 analysis website for gene ontology and Kyoto Encyclopedia of Genes and Genomes enrichment analyses and visualization. …”
Publicado 2023
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895por Liang, Yue-ya, Huang, Jia-cheng, Tang, Rui-xue, Chen, Wen-jie, Chen, Peng, Cen, Wei-luan, Shi, Ke, Gao, Li, Gao, Xiang, Liu, An-gui, Peng, Xiao-tong, Chen, Gang, Huang, Su-ning, Fang, Ye-ying, Gu, Yong-yao“…Subsequently, the putative target genes were sent to Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway analyses. …”
Publicado 2018
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896por Takeji, Yasuaki, Shiomi, Hiroki, Morimoto, Takeshi, Yoshikawa, Yusuke, Taniguchi, Ryoji, Mutsumura-Nakano, Yukiko, Yamamoto, Ko, Yamaji, Kyohei, Tazaki, Junichi, Kato, Eri Toda, Watanabe, Hirotoshi, Yamamoto, Erika, Yamashita, Yugo, Fuki, Masayuki, Suwa, Satoru, Inoko, Moriaki, Takeda, Teruki, Shirotani, Manabu, Ehara, Natsuhiko, Ishii, Katsuhisa, Inada, Tsukasa, Tamura, Toshihiro, Onodera, Tomoya, Shinoda, Eiji, Yamamoto, Takashi, Watanabe, Hiroki, Yaku, Hidenori, Nakatsuma, Kenji, Sakamoto, Hiroki, Ando, Kenji, Soga, Yoshiharu, Furukawa, Yutaka, Sato, Yukihito, Nakagawa, Yoshihisa, Kadota, Kazushige, Komiya, Tatsuhiko, Minatoya, Kenji, Kimura, Takeshi“…SETTING: The Coronary Revascularization Demonstrating Outcome Study in Kyoto (CREDO-Kyoto) AMI Registries Wave-1 (2005–2007, 26 centres) and Wave-2 (2011–2013, 22 centres). …”
Publicado 2021
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897por Xu, Yaqin, Dong, Yingying, Deng, Yunhua, Qi, Qianrong, Wu, Mi, Liang, Hongmei, She, Qiuyun, Guo, Qing“…As for the functional analysis of the mRNAs in the network, a FoxO signaling pathway, an autophagy and cellular senescence were the top enrichment terms based on the Kyoto Encyclopedia of Genes and Genomes analysis. …”
Publicado 2021
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898“…Additionally, gene ontology (GO) and Kyoto encyclopedia of genes and genomes pathway analyses were performed using the Database for Annotation, Visualization, and Integrated Discovery database. …”
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899“…The location of the gene mutation is close to the most common mutation type of lipoprotein glomerulopathy, ApoE Kyoto (Arg25Cys), so we speculate that its pathogenic role might be the similar to that of ApoE Kyoto (Arg25Cys).…”
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900por Villani, Cédric“…Nous voici emportés dans le quotidien d'un jeune chercheur de talent : un véritable « road-trip », de Kyoto à Princeton et de Lyon à Hyderabad, dont Villani tient, au jour le jour, le carnet de bord. …”
Publicado 2012
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