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9541por Jiang, Yiyao, Zhang, Xu, Wei, Ting, Qi, Xianjie, Abba, Isah Amir, Zhang, Nana, Chen, Yao, Wang, Ran, Shi, Chao“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were performed for the key genes in modules. …”
Publicado 2022
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9542por Zhang, Qian, Huang, Hui, Zhang, Meijun, Fang, Chuling, Wang, Na, Jing, Xiaoyan, Guo, Jian, Sun, Wei, Yang, Xiaoyu, Xu, Zuojun“…The identified genes were included for further pathway analysis using Gene Ontology (GO) and the Kyoto Encyclopedia of Genes and Genomes (KEGG). Additionally, we used the STRING database to construct a protein network of rare variants and Cytoscape to identify hub genes of signaling pathways. …”
Publicado 2022
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9543por Nian, Rui, Jiang, Huihui, Zhao, Jiangman, Hou, Wanle, Zhang, Hua, Ma, Jiangtao, Lv, Pengbiao, Jiang, Lisha, Wang, Yongpan, Xu, Yue, Wu, Shouxin, Lou, Jingwei, Li, Wanjun“…Importantly, five mutated genes including ALK, cytidine deaminase (CDA), SMAD family member 4 (SMAD4), superoxide dismutase 2 (SOD2) and Von Hippel-Lindau tumor suppressor (VHL) genes were uniquely detected in the BM group, and they were enriched in the Hippo signaling pathway, pyrimidine metabolism and pantothenate and co-enzyme A (CoA) biosynthesis, as demonstrated using Kyoto Encyclopedia of Genes and Genomes enrichment analysis. …”
Publicado 2022
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9544por Zhu, Tong, Wang, Tianyu, Feng, Zijun, Gao, Furong, Zhang, Jieping, Jin, Caixia, Tian, Haibin, Xu, Jingying, Chen, Hao, Ou, Qingjian, Wang, Juan, Xu, Guotong, Lu, Lixia“…Overexpression of Gmfb inhibited Caki-2 cell proliferation, migration, and invasion and decreased mitochondrial membrane potential. Gene ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses considering Gmfb co-expressed differentially expressed genes (DEGs) showed that collecting duct acid secretion and mineral absorption ranked were the most important upregulated and downregulated DEGs, respectively. …”
Publicado 2022
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9545por Gholais, Noha Saleh, Shi, Chunrui, Zhang, Jing, Liao, Bei, Albarmaqi, Rowida A., Tang, Xiaolong, Mi, Leyuan“…R program was used for the Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis of the potential therapeutic targets. …”
Publicado 2022
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9546“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses were conducted using the clusterProfiler R package. …”
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9547por Shi, Meiting, Yang, Xiaofeng, Ding, Yuzhen, Sun, Lu, Zhang, Ping, Liu, Mengyuan, Han, Xiaoxue, Huang, Zhengrui, Li, Ruiman“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses of the DEGs were then conducted. …”
Publicado 2022
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9548por Lei, Yuhe, Chan, Meiching, Liu, Haiyan, Lyu, Wenyu, Chen, Lei, Zhong, Yinqin, Gan, Hua, Wang, Mei, Qi, Ming, Guo, Yu, Liu, Junshan, Zhang, Enxin“…Through protein-protein interaction (PPI), Gene Ontology (GO) enrichment, and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses, the potential targets and corresponding ingredients of EF against prostate cancer cells were obtained. …”
Publicado 2022
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9549por Liu, Yongjun, Al‐Adra, David P., Lan, Ruoxin, Jung, Geunyoung, Li, Huihua, Yeh, Matthew M., Liu, Yao‐Zhong“…At a false discovery rate (FDR) of 0.10, 13% (n = 4335) of transcripts were up‐regulated and 19% (n = 6454) of transcripts were down‐regulated in HCC versus non‐neoplastic tissue. Eighty‐five Kyoto Encyclopedia of Genes and Genomes pathways were differentially regulated (FDR, <0.10), with almost all pathways (n = 83) being up‐regulated in HCC versus non‐neoplastic tissue. …”
Publicado 2022
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9550“…The 40 patients’ endometrium was identified the differentially expressed proteins (DEPs) using liquid chromatography tandem mass spectrometry. The Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis and Gene Ontology (GO) showed that the DEPs related pathways and functions between PCOS and controls. …”
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9551“…H6-L, respectively. The Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis foundsix identified pathways related to the immune system. …”
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9552por Sun, Chenyu, Chen, Yue, Kim, Na Hyun, Lowe, Scott, Ma, Shaodi, Zhou, Zhen, Bentley, Rachel, Chen, Yi-Sheng, Tuason, Margarita Whitaker, Gu, Wenchao, Bhan, Chandur, Tuason, John Pocholo Whitaker, Thapa, Pratikshya, Cheng, Ce, Zhou, Qin, Zhu, Yanzhe“…Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses were performed. …”
Publicado 2022
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9553“…DEGs were used to conduct Gene Ontology (GO) terms, Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways enrichment analyses, and protein-protein interaction (PPI) analysis. …”
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9554“…Then, Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), gene set enrichment analysis, version 3.0 (GSEA), sequence-based RNA adenosine methylation site predictor (SRAMP) online websites, and RNA immunoprecipitation (RIP) experiments were used to predict the model-related potential pathways, m6A modifications, and the association between model genes and m6A. …”
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9555“…Gene Ontology (GO) enrichment, Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis and Gene set enrichment analysis (GSEA) were applied to explore potential functions of hub genes. …”
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9556“…We performed gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses on mRNAs regulated by lncRNAs in the ceRNA network. …”
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9557por Li, Jingyan, Wu, Junxuan, Huang, Junying, Cheng, Yuanyuan, Wang, Dawei, Liu, Zhongqiu“…Furthermore, core targets of RC on MI were identified by the protein-protein interaction (PPI) network and analyzed with Gene Ontology (GO) analysis and the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis. …”
Publicado 2022
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9558“…METHODS: Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses were performed on the differentially expressed genes (DEGs) of DCM. …”
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9559por Zhang, Peixu, Zhang, Xiaobo, Xiong, Peiyu, Zhong, Chun, Zhou, Zhen, Jia, Bo, Liu, Xinglong“…Furthermore, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) were used to analyze the metabolism-related signaling pathways affected by RBP. …”
Publicado 2022
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9560“…Differential expression analysis was performed to identify differentially expressed genes (DEGs) and miRNAs (DEMs). Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses, protein-protein interaction (PPI) analysis and expression quantitative trait loci (eQTL) analysis of DEGs were conducted. …”
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