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1341por Tomasoni, Mattia, Gómez, Sergio, Crawford, Jake, Zhang, Weijia, Choobdar, Sarvenaz, Marbach, Daniel, Bergmann, Sven“…AVAILABILITY AND IMPLEMENTATION: MONET is a command line tool for Linux, based on Docker and Singularity containers; the core algorithms were written in R, Python, Ada and C++. …”
Publicado 2020
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1342por Fischer, Christian A., Besora-Casals, Laura, Rolland, Stéphane G., Haeussler, Simon, Singh, Kritarth, Duchen, Michael, Conradt, Barbara, Marr, Carsten“…We provide MitoSegNet in a toolbox for Windows and Linux operating systems that combines segmentation with morphological analysis.…”
Publicado 2020
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1343“…Feasibility testing in large-scale wireless sensor networks is verified on NS2 simulation and more performances are evaluated on an embedded Linux platform.…”
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1344por Camiolo, Salvatore, Suárez, Nicolás M, Chalka, Antonia, Venturini, Cristina, Breuer, Judith, Davison, Andrew J“…GRACy is written in Python and is embedded in a graphical user interface with all required dependencies installed by a single command. It runs on the Linux operating system and is designed to allow the future implementation of a cross-platform version. …”
Publicado 2020
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1345“…The toolbox provides two methods for screening single cells, three common methods for smoothing scHi-C data, three efficient methods for calculating the pairwise similarity of cells, three methods for embedding single cells, three methods for clustering cells, and a build-in function to visualize the cells embedding in a two-dimensional or three-dimensional plot. scHiCTools, written in Python3, is compatible with different platforms, including Linux, macOS, and Windows.…”
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1346“…Our framework works by collecting streams of system calls during the execution of a process using the Linux Trace Toolkit Next Generation(LTTng), sending them to a machine learning module that reveals anomalous subsequences of system calls based on their execution times and frequency. …”
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1347“…This paper presents the design, implementation, and evaluation of the proposed network architecture which introduces virtually no additional delays as compared to the Linux communication stack, automates communication bootstrapping, and uses a novel application-network integration concept that enables application-aware networks, as well as network-aware applications. …”
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1348“…The results are combined to obtain a single variant call format file for each sample and variants are annotated by integrating a wide range of information extracted from several reference databases, ultimately allowing variant and gene prioritization according to different criteria. iWhale allows users to conduct a complex series of WES analyses with a powerful yet customizable and easy-to-use tool, running on most operating systems (macOs, GNU/Linux and Windows). iWhale code is freely available at https://github.com/alexcoppe/iWhale and the docker image is downloadable from https://hub.docker.com/r/alexcoppe/iwhale.…”
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1349por Pasqualin, Côme, Gannier, François, Yu, Angèle, Benoist, David, Findlay, Ian, Bordy, Romain, Bredeloux, Pierre, Maupoil, Véronique“…Spiky was written in ImageJ Macro Language and JAVA, and works under Windows, Mac and Linux operating systems. Conclusion: Spiky provides a complete working interface to process and analyze cardiac physiology research data.…”
Publicado 2022
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1350por Porr, Marc, Schwarz, Sebastian, Lange, Ferdinand, Niemeyer, Laura, Hentrop, Thorleif, Marquard, Daniel, Lindner, Patrick, Scheper, Thomas, Beutel, Sascha“…The embedded computer runs an open source Linux operating system and can in principle be used to run any kind of software needed for communicating with the laboratory device. …”
Publicado 2020
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1351por Carland, Matt, Pedersen, Haley, Bose, Madhuchanda, Novković, Biljana, Manson, Charles, Lahan, Shany, Pavlenko, Alex, Yazdi, Puya G., Grabherr, Manfred G.“…The software is implemented in C++ and compiles and runs on Linux and MacOS. The source code is available under the MIT license from https://github.com/selfdecode/rd-eztraits.…”
Publicado 2022
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1352“…AVAILABILITY AND IMPLEMENTATION: UMI4Cats is implemented as an R package supported on Linux, MacOS and MS Windows. UMI4Cats is available from Bioconductor (https://www.bioconductor.org/packages/release/bioc/html/UMI4Cats.html) and GitHub (https://github.com/Pasquali-lab/UMI4Cats). …”
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1353por Siragusa, Enrico, Haiminen, Niina, Finkers, Richard, Visser, Richard, Parida, Laxmi“…AVAILABILITY AND IMPLEMENTATION: Executables for Linux at http://github.com/Computational Genomics/HaplotypeAssembler. …”
Publicado 2019
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1354por Martin, Samuel, Ayling, Martin, Patrono, Livia, Caccamo, Mario, Murcia, Pablo, Leggett, Richard M“…AVAILABILITY AND IMPLEMENTATION: Source code is freely available to download from https://github.com/SR-Martin/metacortex, is implemented in C and supported on MacOS and Linux. The version used for the results presented in this article is available at doi.org/10.5281/zenodo.7273627. …”
Publicado 2023
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1355“…The O2 read-out chain will use commodity x86 Linux servers equipped with custom PCIe FPGA-based read-out cards. …”
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1356por Beck, H P, Abolins, M, Battaglia, A, Blair, R, Bogaerts, A, Bosman, M, Ciobotaru, M, Cranfield, R, Crone, G, Dawson, J, Dobinson, Robert W, Dobson, M, Dos Anjos, A, Drake, G, Ermoline, Y, Ferrari, R, Ferrer, M L, Francis, D, Gadomski, S, Gameiro, S, Gorini, B, Green, B, Haberichter, W N, Haeberli, C, Hauser, R, Hinkelbein, C, Hughes-Jones, R, Joos, M, Kieft, G, Klous, S, Korcyl, K, Kordas, K, Kugel, A, Leahu, L, Lehmann, G, Martin, M, Mapelli, L, Meessen, C, Meirosu, C, Misiejuk, A, Mornacchi, G, Müller, M, Nagasaka, Y, Negri, A, Pasqualucci, E, Pauly, T, Petersen, J, Pope, B, Schlereth, J L, Spiwoks, R, Stancu, S, Strong, J, Sushkov, S, Szymocha, T, Tremblet, L, Ünel, G, Vandelli, W, Vermeulen, J, Werner, P, Wheeler-Ellis, S, Wickens, F, Wiedenmann, W, Yu, M, Yasu, Y, Zhang, J, Zobernig, H“…The Event-Builder is based on a farm of O(100) PCs, interconnected via Gigabit Ethernet to O(150) ROSs. These PCs run Linux and multi-threaded software applications implemented in C++. …”
Publicado 2007
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1357por Vandelli, W, Abolins, M, Battaglia, A, Beck, H P, Blair, R, Bogaerts, A, Bosman, M, Ciobotaru, M, Cranfield, R, Crone, G, Dawson, J, Dobinson, Robert W, Dobson, M, Dos Anjos, A, Drake, G, Ermoline, Y, Ferrari, R, Ferrer, M L, Francis, D, Gadomski, S, Gameiro, S, Gorini, B, Green, B, Haberichter, W, Haberli, C, Hauser, R, Hinkelbein, C, Hughes-Jones, R, Joos, M, Kieft, G, Klous, S, Korcyl, K, Kordas, K, Kugel, A, Leahu, L, Lehmann, G, Martin, B, Mapelli, L, Meessen, C, Meirosu, C, Misiejuk, A, Mornacchi, G, Müller, M, Nagasaka, Y, Negri, A, Pasqualucci, E, Pauly, T, Petersen, J, Pope, B, Schlereth, J L, Spiwoks, R, Stancu, S, Strong, J, Sushkov, S, Szymocha, T, Tremblet, L, Ünel, G, Vermeulen, J, Werner, P, Wheeler-Ellis, S, Wickens, F, Wiedenmann, W, Yu, M, Yasu, Y, Zhang, J, Zobernig, H“…The Event Builder is based on a farm of O(100) PCs, interconnected via a Gigabit Ethernet to O(150) ROSs. These PCs run Linux and multi-threaded software applications implemented in C++. …”
Publicado 2007
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1358“…The final TDAQ data-logging system has been installed using 6 Linux PCs, holding 24 disks of 500 GB each, managed by three RAID controllers on each PC. …”
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1359por Jones, Christopher“…The design is built around the libdispatch framework created by Apple Inc. (a port for Linux is available) whose central concept is the use of task queues. …”
Publicado 2012
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1360“…This book can serve as a textbook on R for beginners as well as more advanced users, working on Windows, MacOs or Linux OSes. The first part of the book deals with the heart of the R language and its fundamental concepts, including data organization, import and export, various manipulations, documentation, plots, programming and maintenance. …”
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