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  1. 1901
    “…S-plot2 is freely available through https://bitbucket.org/lkalesinskas/splot and is supported on the Linux and MS Windows operating systems.…”
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    S-plot2: Rapid Visual and Statistical Analysis of Genomic Sequences
  2. 1902
    “…VAPiD is programmed in Python and is compatible with Windows, Linux, and Mac OS systems. CONCLUSIONS: We have created a portable, lightweight, user-friendly, internet-enabled, open-source, command-line genome annotation and submission package to facilitate virus genome submissions to NCBI GenBank. …”
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    VAPiD: a lightweight cross-platform viral annotation pipeline and identification tool to facilitate virus genome submissions to NCBI GenBank
  3. 1903
    “…Odyssey was built with compatibility in mind, and thus utilizes the Singularity container solution, which can be run on Linux, MacOS, and Windows platforms. It is also easily scalable from a simple desktop to a High-Performance System (HPS). …”
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    Odyssey: a semi-automated pipeline for phasing, imputation, and analysis of genome-wide genetic data
  4. 1904
    “…However, this algorithm had two major shortcomings: (i) it was automated and published as a set of bash scripts, and hence was Linux-specific, and not user friendly, and (ii) it could result in very stringent sequence subselection when extremely slow-evolving sequences were present. …”
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    LS(X): automated reduction of gene-specific lineage evolutionary rate heterogeneity for multi-gene phylogeny inference
  5. 1905
    “…The website is implemented within the LAMP web service stacks. In particular, using Linux as the operative system, Apache as the HTTP Server, MySQL as the database management system, and PHP as the programming language for the web. …”
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    The diatomic molecular spectroscopy database
  6. 1906
    “…The tools employed in the NGS_SNPAnalyzer were compiled on Microsoft Windows (version 7, 10) and Ubuntu Linux (version 16.04, 17.0.4). RESULTS: The NGS_SNPAnalyzer not only includes the functionalities for variant calling and annotation but also provides quality control, mapping, and filtering details to support all procedures from next-generation sequencing (NGS) data to variant visualization. …”
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    NGS_SNPAnalyzer: a desktop software supporting genome projects by identifying and visualizing sequence variations from next-generation sequencing data
  7. 1907
    “…MATERIALS AND METHODS: Molecular docking simulation was performed by using AutoDock 4.2 on Linux operation system. Docking protocol was validated by using root mean square deviation (RMSD) value using redocking and cross-docking methods. …”
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    Docking Study on Anti-HIV-1 Activity of Secondary Metabolites from Zingiberaceae Plants
  8. 1908
    “…The source code can be compiled on Linux, macOS and Microsoft Windows platforms. The algorithm is implemented in C++ as standalone program. …”
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    ProPIP: a tool for progressive multiple sequence alignment with Poisson Indel Process
  9. 1909
    “…The software is written in MATLAB, core image processing is performed using the Statistical Parametric Mapping toolbox, and standalone executable binaries are available for Windows, Mac, and Linux platforms. LeGUI was tested and validated on 51 datasets from two universities. …”
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    LeGUI: A Fast and Accurate Graphical User Interface for Automated Detection and Anatomical Localization of Intracranial Electrodes
  10. 1910
    “…RESULTS: We present a Linux-based toolkit, RNA-combine, to automatically perform the quality assessment, downstream analysis of the transcriptome data generated from different sequencing platforms, including bulk RNA-seq (Illumina platform), single cell RNA-seq (10x Genomics) and Iso-Seq (PacBio) and visualization of the results. …”
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    RNA-combine: a toolkit for comprehensive analyses on transcriptome data from different sequencing platforms
  11. 1911
    por Pang, Chunyu, Guan, Zhen
    Publicado 2022
    “…Through the transplantation of embedded Linux system, the development of communication interface and the external acquisition sensing device, we collect the information of working status and running status, and transmit it to the database built in the cloud through the 4G module on the motherboard. …”
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    Community Environmental Detection and Community Outdoor Space Health Promotion Based on Cloud Resource Scheduling Mechanism
  12. 1912
    por Yang, Xu, Kasahara, Masahiro
    Publicado 2022
    “…The technique used in LPMX allows LPMX to run purely in userspace without root privileges even during installation, thus ensuring that we can use LPMX at any Linux clusters with major distributions. The lowest overhead for launching containers with LPMX gives us courage to isolate tools as much as possible into small containers, thereby minimizing the chance of conflicts. …”
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    LPMX: a pure rootless composable container system
  13. 1913
    por Zhang, Maoyue
    Publicado 2022
    “…A Hadoop cluster consisting of 3 nodes is built on the Linux system, and the environment required for Opencv execution is compiled for each node, which provides support for subsequent parallel optimization, feature extraction, feature fusion, and recognition of student facial images. …”
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    Educational Psychology Analysis Method for Extracting Students' Facial Information Based on Image Big Data
  14. 1914
    “…The workflow runs natively on Linux and macOS or via a Docker container. We ran Tourmaline on a 16S ribosomal RNA amplicon data set from Lake Erie surface water, showing its utility for parameter optimization and the ability to easily view interactive visualizations through the HTML report, QIIME 2 viewer, and R- and Python-based Jupyter notebooks. …”
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    Tourmaline: A containerized workflow for rapid and iterable amplicon sequence analysis using QIIME 2 and Snakemake
  15. 1915
    “…Here we present Ribosomal Profiling Reports (RP-REP), a new open-source cloud-enabled software that allows users to execute start-to-end gene-level ribosomal profiling and RNA-Seq analysis on a pre-configured Amazon Virtual Machine Image (AMI) hosted on AWS or on the user’s own Ubuntu Linux server. The software works with FASTQ files stored locally, on AWS S3, or at the Sequence Read Archive (SRA). …”
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    RP-REP Ribosomal Profiling Reports: an open-source cloud-enabled framework for reproducible ribosomal profiling data processing, analysis, and result reporting
  16. 1916
    “…METHODS: 2FAST2Q is built in Python, with published standalone executables in Windows MS, MacOS, and Linux. It has a familiar user interface, and uses an advanced custom sequence searching algorithm. …”
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    2FAST2Q: a general-purpose sequence search and counting program for FASTQ files
  17. 1917
    por Upton, Eben
    Publicado 2016
    Libro
    Raspberry Pi user guide
  18. 1918
    por Segal, Ben
    Publicado 2019
    “…</p> <p>From 1990, he was a member of the small team which developed the “SHIFT” system, changing CERN’s computing systems from central mainframes to distributed Unix clusters - and today many tens of thousands of Linux nodes forming the Worldwide LHC Grid. From 2000 he managed part of the European Data Grid project. …”
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    Apprenticeship - 60 years of computing experience (part 2)
  19. 1919
    por Brasseur, VM (Vicky)
    Publicado 2019
    “…<br /> <br /> Vicky has been a moderator and author for&nbsp;opensource.com, an author for&nbsp;Linux Journal, the Vice President of the&nbsp;Open Source Initiative, and is a&nbsp;frequent and popular&nbsp;speaker&nbsp;at free/open source conferences and events. …”
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    The real costs of Open Source Sustainability
  20. 1920
    por Tangaro, Marco Antonio
    Publicado 2023
    “…Laniakea allows the on-demand encryption of the entire storage volume attached to the virtual machine, using the Linux kernel encryption module. The level of disk encryption is completely transparent to software applications, in this case Galaxy: data are encrypted and decrypted on-the-fly when writing and reading, respectively. …”
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    On-demand cloud-based secure environments for analysing personal and health data
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