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  1. 2181
    “…FINDINGS: Through pairwise and multiple alignments of these genes, we have shown that the homology between these genes ranges from 50% to 99% in complete gene sequences and from 70-100% in the exonic regions, with CCL3L1 and CCL3L3 being identical. By use of MEGA 4 and BioEdit, we aligned sense primers, anti-sense primers, and probes used in several previously described assays against pre-multiple alignments of all four chemokine genes. …”
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    Variations in CCL3L gene cluster sequence and non-specific gene copy numbers
  2. 2182
    “…Phylogenetic trees were built with MEGA 4.0 software using maximum composite likelihood algorithm and neighbor‐joining method for tree topology reconstruction. …”
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    Genetic composition of contemporary swine influenza viruses in the West Central region of the United States of America
  3. 2183
    “…Biologic rhythms gleaned from power spectral plots obtained by modern methods revealed life style and behavior of extinct mega-fauna.…”
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    Biologic Rhythms Derived from Siberian Mammoths' Hairs
  4. 2184
    “…A consensus Maximum Parsimony phylogenetic tree with a bootstrap analysis setting of 1,000 replicates was constructed using MEGA4. Structural templates relevant to our target (CHAP(K)) were identified, processed in Expresso and used to generate a 3D model in the alignment mode of SWISS-MODEL. …”
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    In silico modeling of the staphylococcal bacteriophage-derived peptidase CHAP(K)
  5. 2185
    “…We also assessed the genetic relatedness of the 56-kDa TSA gene among eight Taiwan-H isolates, thirteen other Taiwanese isolates and 104 DNA sequences deposited in the GenBank database using MEGA version 5.0 and PHYLIP version 3.66. We found that the Taiwan-H isolates formed into a new cluster, which was designated the Taiwan Gilliam-variant (TG-v) cluster to distinguish it from the Japanese Gilliam-variant (JG-v) cluster. …”
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    New Genotypes of Orientia tsutsugamushi Isolated from Humans in Eastern Taiwan
  6. 2186
    “…Abdominal ultrasonography and sonomorphological abnormalities of periportal fibrosis were performed with Aloka portable ultrasound machine (Hellige, Freiburg, Germany) fitted with a convex probe of 3.5 mega Hertz was also performed in the field clinic on all patients who had S. mansoni eggs in their faeces. …”
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    Evaluation of Schistosoma Mansoni Morbidity One Year After Praziquantel Treatment in Rhino Camp and Obongi in West Nile, Uganda
  7. 2187
    “…Sequences developed in the current study and from databases of the same and related taxa were analyzed to calculate the congeneric and conspecific genetic divergences using Kimura 2-parameter distance model, and a Neighbor Joining tree was created using software MEGA5.1. The DNA barcoding approach delineated 21 distinct species showing 4.33 folds of difference between the nearest congeners. …”
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    Identification and Re-Evaluation of Freshwater Catfishes through DNA Barcoding
  8. 2188
    “…We use the fire ecology and biogeographical patterns of Callitris intratropica, a fire-sensitive conifer, and the Asian water buffalo (Bubalus bubalis), an introduced mega-herbivore, to examine the hypothesis that the continuation of Aboriginal burning and cultural integration of buffalo contribute to greater savanna heterogeneity and diversity in central Arnhem Land (CAL) than Kakadu National Park (KNP). …”
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    Cultural legacies, fire ecology, and environmental change in the Stone Country of Arnhem Land and Kakadu National Park, Australia
  9. 2189
    “…Over our 714,852 ha study area in central Saskatchewan, Canada, the AGB estimate generated from the forest inventory was approximately 40 Mega tonnes (Mt); however, the inventory estimate represents only 51% of the total study area. …”
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    Spatially Explicit Large Area Biomass Estimation: Three Approaches Using Forest Inventory and Remotely Sensed Imagery in a GIS
  10. 2190
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    Critical role of zinc finger protein 521 in the control of growth, clonogenicity and tumorigenic potential of medulloblastoma cells
  11. 2191
    “…In sharp contrast, relationships among the superfamilies of more advanced moths and butterflies that comprise the mega-diverse clade Apoditrysia (ca. 145,000 spp.) remain mostly poorly supported. …”
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    Can RNA-Seq Resolve the Rapid Radiation of Advanced Moths and Butterflies (Hexapoda: Lepidoptera: Apoditrysia)? An Exploratory Study
  12. 2192
    “…Genetic distances calculated with MEGA 4.1 using the complete duplicate CR sequences revealed that within turtle subspecies, genetic distances between orthologous copies from different individuals were 0.63% for CR1 and 1.2% for CR2app:addword:respectively, and the average distance between paralogous copies of CR1 and CR2 was 4.8%. …”
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    Recombination and Evolution of Duplicate Control Regions in the Mitochondrial Genome of the Asian Big-Headed Turtle, Platysternon megacephalum
  13. 2193
    “…BACKGROUND: Genome-wide significant associations of schizophrenia with eight SNPs in the CNNM2, MIR137, PCGEM1, TRIM26, CSMD1, MMP16, NT5C2 and CCDC68 genes have been identified in a recent mega-analysis of genome-wide association studies. …”
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    The impact of the genome-wide supported variant in the cyclin M2 gene on gray matter morphology in schizophrenia
  14. 2194
    “…GABA was detected with a MEGA-PRESS J-editing MRS sequence. The mean thalamic GABA level was significantly increased in smelter workers compared to controls (p = 0.009). …”
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    Thalamic GABA Predicts Fine Motor Performance in Manganese-Exposed Smelter Workers
  15. 2195
    “…Polygenic risk scores were calculated using estimates of the log of odds ratios from the Psychiatric Genomics Consortium GWAS stage-1 mega-analysis of schizophrenia and bipolar disorder. …”
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    Are Genetic Risk Factors for Psychosis Also Associated with Dimension-Specific Psychotic Experiences in Adolescence?
  16. 2196
    “…The sequencing results were submitted to GenBank and then analyzed by phylogenetic tree analysis using BioEdit and Mega5 software. The phylogenetic tree of the hemagglutinin (HA) and neuraminidase genes revealed that A/Changsha/2/2013 (H7N9) and all the new H7N9 viruses in 2013 were in a large cluster, and their nucleotide evolutionary distances were closely associated. …”
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    Analysis of the full-length genome of a novel strain of the H7N9 avian influenza virus
  17. 2197
    “…The objective of this study was to reassess the factor structure of the TIS applied to representative samples exposed to general trauma of two Brazilian mega-cities. METHODS: The sample comprised 3,223 participants reporting at least one traumatic experience. …”
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    Structural Validity of the Tonic Immobility Scale in a Population Exposed to Trauma: Evidence from Two Large Brazilian Samples
  18. 2198
    “…Nevertheless, while chronic foot disease in captive mega-herbivores is widely reported, foot radiographic imaging is confronted with scarcity of studies. …”
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    Rhinoceros Feet Step Out of a Rule-of-Thumb: A Wildlife Imaging Pioneering Approach of Synchronized Computed Tomography-Digital Radiography
  19. 2199
    “…These strategies are often mirrored in similar programs to save other valued and endangered mega-fauna. Through GIS analysis, collating data from across the literature, and combining this information within a modelling and decision analysis framework, we analysed which strategy or combination of strategies is the most cost-effective at maintaining wild orangutan populations, and under what conditions. …”
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    Conservation Strategies for Orangutans: Reintroduction versus Habitat Preservation and the Benefits of Sustainably Logged Forest
  20. 2200
    “…Phylogenetic tree was constructed from VP1 gene sequences applying Maximum Likelihood method using Kimura 2- parameter model in MEGA program v 5.0. A total of 72 (14.3%) out of 502 wild-type 1 polioviruses were found circulating in border areas of both countries during 2010–2012. …”
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    Molecular Characterization and Phylogenetic Relationship of Wild Type 1 Poliovirus Strains Circulating across Pakistan and Afghanistan Bordering Areas during 2010–2012
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