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2581“…Phylogenetic tree, amino acid homology, genetic variation and genotype analyses of the EV71VP1 protein were performed with MEGA 6.0 software. RESULTS: The amino acid identity was found to be 88.33%–100% among the 3712 EV71 strains, 93.47%–100% compared with vaccine strain H07, and 93.04%–100% compared with vaccine strains FY7VP5 or FY-23 K-B. …”
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2582“…A preliminary design of a mega-electron-volt (MeV) monochromator with 10(−5) energy spread for ultrafast electron diffraction (UED) and ultrafast electron microscopy (UEM) is presented. …”
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2583por Yona, Clara M., Vanhee, Merijn, Simulundu, Edgar, Makange, Mariam, Nauwynck, Hans J., Misinzo, Gerald“…Phylogenetic analysis to study the relatedness of current ASFV with those that caused previous outbreaks in Tanzania and representatives of all known 24 ASFV was performed using the Maximum Composite Likelihood model with 1000 bootstrap replications in MEGA 6.0. RESULTS: ASFV was confirmed to cause disease in sampled domestic pigs. …”
Publicado 2020
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2584“…The phylogenetics, parsimony informative sites and mutation analyses were performed using MEGA X, Multiple sequence alignment program (MAFFT), and Virus Pathogen Resource. …”
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2585por Idris, Abeer Babiker, Hassan, Hadeel Gassim, Ali, Maryam Atif Salaheldin, Eltaher, Sulafa Mohamed, Idris, Leena Babiker, Altayb, Hisham N., Abass, Amin Mohamed, Ibrahim, Mustafa Mohammed Ahmed, Ibrahim, El-Amin Mohamed, Hassan, Mohamed A.“…The evolutionary aspects were analyzed using MEGA7 software. RESULTS: Molecular detection of H. pylori has shown that 28 (37.33%) of the patients were positive for H. pylori and no significant differences were found in sociodemographic characteristics, endoscopy series, and H. pylori infection. …”
Publicado 2020
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2586por Li, Zhongkang, Xin, Xiuqing, Xiong, Bin, Zhao, Dongdong, Zhang, Xueli, Bi, Changhao“…By knocking out either CBB operon genes on the operon or mega-plasmid of R. eutropha, we found that both CBB operons were active and contributed almost equally to the carbon fixation process. …”
Publicado 2020
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2587Nutritional supplements and mother’s milk composition: a systematic review of interventional studies“…No difference was found between mega dose and single dose administration of minerals.…”
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2588“…The phylogenetic tree was constructed with MEGA 7.0 using neighbor-joining method based on capsid gene fragment of norovirus. …”
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2589“…Multiple sequence alignment of retrieved sequences was performed using Clustal Omega and the phylogenetic tree was constructed using Mega X software. Bioinformatics tools are used to better understand and determine the 3D structure of cellulase. …”
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2590por Enayati, Maedeh, Bozorg-Haddad, Omid, Fallah-Mehdipour, Elahe, Zolghadr-Asli, Babak, Chu, Xuefeng“…In addition to the status quo, a series of climate change projections (i.e., RCP 2.6, RCP 4.5, and RCP 8.5) were integrated into the proposed decision support framework as well. Resultantly, the mega decision matrix for this problem was composed of 56 evaluation criteria and 27 feasible alternatives. …”
Publicado 2021
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2591por Sarkar, Rakesh, Saha, Ritubrita, Mallick, Pratik, Sharma, Ranjana, Kaur, Amandeep, Dutta, Shanta, Chawla-Sarkar, Mamta“…Phylogenetic tree was constructed by using MEGA (version X) and UShER. RESULTS: In this study, we reported the emergence of a novel variant of SARS-CoV-2, named B.1.1.526, in India. …”
Publicado 2022
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2592por Ongor, Hasan, Timurkaan, Necati, Abayli, Hasan, Karabulut, Burak, Kalender, Hakan, Tonbak, Sukru, Eroksuz, Hatice, Çetinkaya, Burhan“…Based on the nucleotide sequence of the MEQ gene of the MDV-1/TR-21/turkey strain, a phylogenetic tree was created using the MEGA-X software with the Maximum Likelihood Method (in 1000 replicates). …”
Publicado 2022
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2593por Krishna, Stuti, Modha, Kaushal, Parekh, Vipulkumar, Patel, Ritesh, Chauhan, Digvijay“…Phylogenetic analysis of the nucleotide and protein sequences of PHYA genes through MEGA X delineated the conservation and evolution of Lablab purpureus PHYA3 (LprPHYA3) probably from PHYA genes of Vigna unguiculata, Glycine max and Vigna angularis. …”
Publicado 2022
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2594por Mundisugih, Juan, Gao, Caroline X, Ikin, Jillian F, Abramson, Michael J, Brown, David, Biswas, Sinjini, Dewar, Elizabeth M, Liew, Danny, Stub, Dion“…BACKGROUND AND AIMS: Mega-wild fires are exposing large communities to weeks or months of high concentration smoke-related fine particulate air pollution (PM). …”
Publicado 2022
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2595“…Multiple sequence alignment and molecular phylogeny analyses were conducted using the MEGA 5.0 software, and then the TREE VIEW program was used to display the phylogenetic tree. …”
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2596por Weber, Heike, Maihofer, Adam X., Jaksic, Nenad, Bojic, Elma Feric, Kucukalic, Sabina, Dzananovic, Emina Sabic, Uka, Aferdita Goci, Hoxha, Blerina, Haxhibeqiri, Valdete, Haxhibeqiri, Shpend, Kravic, Nermina, Umihanic, Mirnesa Muminovic, Franc, Ana Cima, Babic, Romana, Pavlovic, Marko, Mehmedbasic, Alma Bravo, Aukst-Margetic, Branka, Kucukalic, Abdulah, Marjanovic, Damir, Babic, Dragan, Bozina, Nada, Jakovljevic, Miro, Sinanovic, Osman, Avdibegović, Esmina, Agani, Ferid, Warrings, Bodo, Domschke, Katharina, Nievergelt, Caroline M., Deckert, Jürgen, Dzubur-Kulenovic, Alma, Erhardt, Angelika“…The present study uses polygenic risk scores (PRS) derived from the UK Biobank (UKBB) mega-cohort analysis as part of the PGC PTSD GWAS effort to determine the heritable basis of PTSD in the South Eastern Europe (SEE)-PTSD cohort. …”
Publicado 2021
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2597por Carey, Cornelia, Singh, Nisha, Dunn, Joel T., Sementa, Teresa, Mendez, Maria Andreina, Velthuis, Hester, Pereira, Andreia C., Pretzsch, Charlotte Marie, Horder, Jamie, Hader, Stefan, Lythgoe, David J., Rotaru, Diana-Georgina, Gee, Anthony, Cash, Diana, Veronese, Mattia, Murphy, Declan, McAlonan, Grainne“…These two regions were mapped out using MEGA-PRESS voxels and then superimposed on reconstructed PET images. …”
Publicado 2022
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2598“…Phylogenetic trees were constructed by the neighbor-joining method using MegaX. The diversity of the secondary structure was estimated using the PSIPred server. …”
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2599por Shrestha, Prasansah, Karmacharya, Jayram, Han, So-Ra, Lee, Jun Hyuck, Park, Hyun, Oh, Tae-Jin“…The trehalose metabolic pathway was analyzed via bioinformatics tools, such as the dbCAN2 Meta server, Prokka annotation, Multiple Sequence Alignment, ANI calculator, and PATRIC database, which helped to predict trehalose biosynthesis and degradation genes' involvement in the complete genome of Variovorax strains. Likewise, MEGA X was used for evolutionary and conserved genes. …”
Publicado 2022
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2600por Chávez-Larrea, María Augusta, Cholota-Iza, Cristina, Cueva-Villavicencio, Jorge, Yugcha-Díaz, Michelle, Ron-Román, Jorge Washington, Rodríguez-Cabezas, Andrea, Saegerman, Claude, Reyna-Bello, Armando“…The corresponding PCR products were sequenced, analyzed by BLAST/NCBI and the sequences were used to build a concatenated phylogenetic tree, using the MEGA XI software. Overall, 34 out of the 218 samples, (15.6%) were positive to T. theileri by PCR CatL, resulting from 20/83 (24.1%) positives from the Quito abattoir and 14/135 (10.4%) from the Santo Domingo slaughterhouse. …”
Publicado 2023
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