Mostrando 201 - 220 Resultados de 989 Para Buscar '"Minions"', tiempo de consulta: 0.18s Limitar resultados
  1. 201
    “…METHODS: We performed whole-genome sequencing using Oxford Nanopore MinION sequencing on 58 SARS-CoV-2 isolates collected during the ongoing coronavirus disease 2019 pandemic at a tertiary hospital in South Korea and tracked the emergence of mutations responsible for massive spikes in South Korea. …”
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    Investigation of SARS-CoV-2 lineages and mutations circulating in a university-affiliated hospital in South Korea analyzed using Oxford Nanopore MinION sequencing
  2. 202
    “…Illumina and Oxford Nanopore MinION sequencing revealed genome sizes of 20.9 and 24.7 Mb, respectively. …”
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    Draft Genome Sequences of the Highly Halotolerant Strain Zygosaccharomyces rouxii ATCC 42981 and the Novel Allodiploid Strain Zygosaccharomyces sapae ATB301(T) Obtained Using the MinION Platform
  3. 203
    “…Serratia liquefaciens strain S1 was isolated from mixed greens and sequenced with short-read Illumina MiSeq technology and long-read MinION technology. Hybrid sequence assembly generated a complete single circular chromosome and two extrachromosomal contigs, which together encoded 5,098 proteins, 85 tRNAs, and 22 rRNAs.…”
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    Complete Genome Sequence of Tetracycline-Resistant Serratia liquefaciens S1, Isolated from Mixed Greens, Obtained Using Illumina MiSeq and Oxford Nanopore MinION Sequencing
  4. 204
    “…PURPOSE: To evaluate the efficacy of identifying the bacteria by aqueous sampling and vitreous sampling in postoperative infectious endophthalmitis using 16S ribosomal RNA (rRNA) gene analysis with a nanopore sequencer (MinION™). OBSERVATION: A 55-year-old woman who underwent cataract surgery at an ophthalmology clinic 18 days ago was referred to our hospital for suspected endophthalmitis. …”
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    Successful identification of Granulicatella adiacens in postoperative acute infectious endophthalmitis using a bacterial 16S ribosomal RNA gene-sequencing platform with MinION™: A case report
  5. 205
    “…One of these amplicons was sequenced with the MinION device, which produced long reads covering the entire amplified fragment. …”
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    A new hybrid approach for MHC genotyping: high-throughput NGS and long read MinION nanopore sequencing, with application to the non-model vertebrate Alpine chamois (Rupicapra rupicapra)
  6. 206
    “…Here, we report the use of the MinION nanopore sequencer (Oxford Nanopore Technologies) to sequence and assemble an extensively drug-resistant (XDR) isolate, which is part of a modern Beijing sub-lineage strain, prevalent in Western Province, Papua New Guinea. …”
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    A complete high-quality MinION nanopore assembly of an extensively drug-resistant Mycobacterium tuberculosis Beijing lineage strain identifies novel variation in repetitive PE/PPE gene regions
  7. 207
    por Maloney, Jenny G., Santin, Monica
    Publicado 2021
    “…In the present study, Oxford Nanopore MinION long-read sequencing was employed to generate full-length SSU rRNA sequences for seven new Blastocystis subtypes for which no full-length references currently exist: ST21, ST23, ST24, ST25, ST26, ST27, and ST28. …”
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    Mind the Gap: New Full-Length Sequences of Blastocystis Subtypes Generated via Oxford Nanopore Minion Sequencing Allow for Comparisons between Full-Length and Partial Sequences of the Small Subunit of the Ribosomal RNA Gene
  8. 208
    “…It can be used on the miniature-sized and field-deployable sequencing device Oxford Nanopore MinION, with sequencing library preparation time of 10 min. …”
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    AmpliCoV: Rapid Whole-Genome Sequencing Using Multiplex PCR Amplification and Real-Time Oxford Nanopore MinION Sequencing Enables Rapid Variant Identification of SARS-CoV-2
  9. 209
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    Complete Genome Sequence of the Novel Cellulolytic, Anaerobic, Thermophilic Bacterium Herbivorax saccincola Type Strain GGR1, Isolated from a Lab Scale Biogas Reactor as Established by Illumina and Nanopore MinION Sequencing
  10. 210
    “…Here we present a rapid multiplex approach (RespiCoV), combining highly multiplexed PCRs and MinION sequencing suitable for the simultaneous screening for 41 viral and five bacterial agents related to respiratory tract infections, including the human coronaviruses NL63, HKU1, OC43, 229E, Middle East respiratory syndrome coronavirus, SARS-CoV, and SARS-CoV-2. …”
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    RespiCoV: Simultaneous identification of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) and 46 respiratory tract viruses and bacteria by amplicon-based Oxford-Nanopore MinION sequencing
  11. 211
    por Natali, Susan. M., Watts, Jennifer D., Rogers, Brendan M., Potter, Stefano, Ludwig, Sarah M., Selbmann, Anne-Katrin, Sullivan, Patrick F., Abbott, Benjamin W., Arndt, Kyle A., Birch, Leah, Björkman, Mats P., Bloom, A. Anthony, Celis, Gerardo, Christensen, Torben R., Christiansen, Casper T., Commane, Roisin, Cooper, Elisabeth J., Crill, Patrick, Czimczik, Claudia, Davydov, Sergey, Du, Jinyang, Egan, Jocelyn E., Elberling, Bo, Euskirchen, Eugenie S., Friborg, Thomas, Genet, Hélène, Göckede, Mathias, Goodrich, Jordan P., Grogan, Paul, Helbig, Manuel, Jafarov, Elchin E., Jastrow, Julie D., Kalhori, Aram A. M., Kim, Yongwon, Kimball, John, Kutzbach, Lars, Lara, Mark J., Larsen, Klaus S., Lee, Bang-Yong, Liu, Zhihua, Loranty, Michael M., Lund, Magnus, Lupascu, Massimo, Madani, Nima, Malhotra, Avni, Matamala, Roser, McFarland, Jack, McGuire, A. David, Michelsen, Anders, Minions, Christina, Oechel, Walter C., Olefeldt, David, Parmentier, Frans-Jan W., Pirk, Norbert, Poulter, Ben, Quinton, William, Rezanezhad, Fereidoun, Risk, David, Sachs, Torsten, Schaefer, Kevin, Schmidt, Niels M., Schuur, Edward A.G., Semenchuk, Philipp R., Shaver, Gaius, Sonnentag, Oliver, Starr, Gregory, Treat, Claire C., Waldrop, Mark P., Wang, Yihui, Welker, Jeffrey, Wille, Christian, Xu, Xiaofeng, Zhang, Zhen, Zhuang, Qianlai, Zona, Donatella
    Publicado 2019
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    Large loss of CO(2) in winter observed across the northern permafrost region
  12. 212
    “…Here, we validate the MinION’s application to heterozygous crops by creating a de novo genome assembly of a key parent in breeding programs, the clone Pound 7. …”
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    Low-cost assembly of a cacao crop genome is able to resolve complex heterozygous bubbles
  13. 213
    “…Overall, nanopore metagenomic sequencing data-adapted to MinION’s current output-proved sufficient for assembling and characterizing low-complexity microbial communities.…”
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    Assembly methods for nanopore-based metagenomic sequencing: a comparative study
  14. 214
    “…In conclusion, we demonstrated that the workflow and sequencing data obtained from Deeplex on MinION are comparable to those for the MiniSeq, despite the higher raw error rates on MinION, with the added advantage of MinION’s portability, versatility, and low capital costs. …”
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    Application of Targeted Next-Generation Sequencing Assay on a Portable Sequencing Platform for Culture-Free Detection of Drug-Resistant Tuberculosis from Clinical Samples
  15. 215
    “…Intact oligos traverse the MinION’s nanopore relatively quickly compared to the device’s acquisition rate, and exhibit count of events comparable to the baseline. …”
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    Ready-to-use nanopore platform for the detection of any DNA/RNA oligo at attomole range using an Osmium tagged complementary probe
  16. 216
    “…From pathogen detection to genome or plasmid closure, the utility of the Oxford Nanopore Technologies (ONT) MinION for microbiological analysis has been well documented. …”
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    Field-based detection of bacteria using nanopore sequencing: Method evaluation for biothreat detection in complex samples
  17. 217
    “…OBJECTIVE: To disseminate the portable sequencer MinION in developing countries for the main purpose of battling infectious diseases, we found a consortium called Global Research Alliance in Infectious Diseases (GRAID). …”
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    Global research alliance in infectious disease: a collaborative effort to combat infectious diseases through dissemination of portable sequencing
  18. 218
    “…• MinION DNA metabarcoding is a promising tool for species identification in food. • MinION and Illumina MiSeq sequencing platforms perform equally accurate. • Species identification with MinION sequencing requires dedicated bioinformatics.…”
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    Toward on-site food authentication using nanopore sequencing
  19. 219
    “…The fraction of M. tuberculosis reads from MinION sequencing was lower than from Illumina, but monoplexing grade 3+ samples on MinION produced higher read depth than Illumina (P < 0.05) and MinION multiplexing (P < 0.01). …”
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    Genomic Sequencing from Sputum for Tuberculosis Disease Diagnosis, Lineage Determination, and Drug Susceptibility Prediction
  20. 220
    “…We here assessed the capability of the MinION sequencing approach to detect and characterize viruses infecting a water yam plant. …”
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    Nanopore-based detection and characterization of yam viruses
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