Whole-genome single-cell copy number profiling from formalin-fixed paraffin-embedded samples

por Martelotto, Luciano G, Baslan, Timour, Kendall, Jude, Geyer, Felipe C, Burke, Kathleen A, Spraggon, Lee, Piscuoglio, Salvatore, Chadalavada, Kalyani, Nanjangud, Gouri, Ng, Charlotte KY, Moody, Pamela, D’Italia, Sean, Rodgers, Linda, Cox, Hilary, Paula, Arnaud da Cruz, Stepansky, Asya, Schizas, Michail, Wen, Hannah Y, King, Tari A, Norton, Larry, Weigelt, Britta, Hicks, James B, Reis-Filho, Jorge S
Publicado 2017

C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution

por Kouno, Tsukasa, Moody, Jonathan, Kwon, Andrew Tae-Jun, Shibayama, Youtaro, Kato, Sachi, Huang, Yi, Böttcher, Michael, Motakis, Efthymios, Mendez, Mickaël, Severin, Jessica, Luginbühl, Joachim, Abugessaisa, Imad, Hasegawa, Akira, Takizawa, Satoshi, Arakawa, Takahiro, Furuno, Masaaki, Ramalingam, Naveen, West, Jay, Suzuki, Harukazu, Kasukawa, Takeya, Lassmann, Timo, Hon, Chung-Chau, Arner, Erik, Carninci, Piero, Plessy, Charles, Shin, Jay W.
Publicado 2019

Variable levels of drift in tunicate cardiopharyngeal gene regulatory elements

por Colgan, William, Leanza, Alexis, Hwang, Ariel, DeBiasse, Melissa B., Llosa, Isabel, Rodrigues, Daniel, Adhikari, Hriju, Barreto Corona, Guillermo, Bock, Saskia, Carillo-Perez, Amanda, Currie, Meagan, Darkoa-Larbi, Simone, Dellal, Daniel, Gutow, Hanna, Hokama, Pascha, Kibby, Emily, Linhart, Noah, Moody, Sophia, Naganuma, Allison, Nguyen, Diep, Stanton, Ryan, Stark, Sierra, Tumey, Cameron, Velleca, Anthony, Ryan, Joseph F., Davidson, Brad
Publicado 2019

Sensitivity of SARS-CoV-2 RNA polymerase chain reaction using a clinical and radiological reference standard

por Stockdale, Alexander J, Fyles, Fred, Farrell, Catriona, Lewis, Joe, Barr, David, Haigh, Kathryn, Abouyannis, Michael, Hankinson, Beth, Penha, Diana, Fernando, Rashika, Wiles, Rebecca, Sharma, Sheetal, Santamaria, Nuria, Chindambaram, Vijay, Probert, Cairine, Ahmed, Muhammad Shamsher, Cruise, James, Fordham, Imogen, Hicks, Rory, Maxwell, Alice, Moody, Nick, Paterson, Tamsin, Stott, Katharine, Wu, Meng-San, Beadsworth, Michael, Todd, Stacy, Joekes, Elizabeth
Publicado 2021

Viscoelastic Testing and Coagulopathy of Traumatic Brain Injury

por Bradbury, Jamie L., Thomas, Scott G., Sorg, Nikki R., Mjaess, Nicolas, Berquist, Margaret R., Brenner, Toby J., Langford, Jack H., Marsee, Mathew K., Moody, Ashton N., Bunch, Connor M., Sing, Sandeep R., Al-Fadhl, Mahmoud D., Salamah, Qussai, Saleh, Tarek, Patel, Neal B., Shaikh, Kashif A., Smith, Stephen M., Langheinrich, Walter S., Fulkerson, Daniel H., Sixta, Sherry
Publicado 2021

Effects of BCG vaccination on donor unrestricted T cells in two prospective cohort studies

por Gela, Anele, Murphy, Melissa, Rodo, Miguel, Hadley, Kate, Hanekom, Willem A., Boom, W.Henry, Johnson, John L., Hoft, Daniel F., Joosten, Simone A., Ottenhoff, Tom H.M., Suliman, Sara, Moody, D.Branch, Lewinsohn, David M., Hatherill, Mark, Seshadri, Chetan, Nemes, Elisa, Scriba, Thomas J., Briel, Libby, Veldtsman, Hellen, Khomba, Nondumiso, Pienaar, Bernadette, Africa, Hadn, Steyn, Marcia
Publicado 2022

A terpene nucleoside from M. tuberculosis induces lysosomal lipid storage in foamy macrophages

por Bedard, Melissa, van der Niet, Sanne, Bernard, Elliott M., Babunovic, Gregory, Cheng, Tan-Yun, Aylan, Beren, Grootemaat, Anita E., Raman, Sahadevan, Botella, Laure, Ishikawa, Eri, O’Sullivan, Mary P., O’Leary, Seónadh, Mayfield, Jacob A., Buter, Jeffrey, Minnaard, Adriaan J., Fortune, Sarah M., Murphy, Leon O., Ory, Daniel S., Keane, Joseph, Yamasaki, Sho, Gutierrez, Maximiliano G., van der Wel, Nicole, Moody, D. Branch
Publicado 2023

Neonatal SHIV infection in rhesus macaques elicited heterologous HIV-1-neutralizing antibodies

por Hora, Bhavna, Li, Hui, Shen, Xiaoying, Martin, Mitchell, Chen, Yue, Berry, Madison, Evangelous, Tyler, Macintyre, Andrew N., Arus-Altuz, Aria, Wang, Shuyi, Singh, Ajay, Zhao, Chengyan, De Naeyer, Nicole, DeMarco, Todd, Kuykendall, Cindy, Gurley, Thaddeus, Saunders, Kevin O., Denny, Thomas, Moody, M. Anthony, Misamore, John, Lewis, Mark G., Wiehe, Kevin, Cain, Derek W., Montefiori, David C., Shaw, George M., Williams, Wilton B.
Publicado 2023

Design of an HIV Env antigen that binds with high affinity to antibodies against linear, conformational and broadly neutralizing epitopes within V1/V2

por Liao, L, Bonsignori, M, Hwang, K, Moody, AM, Park, R, Crawford, S, Chen, H, Jeffries, TL, Cooper, M, Lu, X, De, R, Karasavvas, N, Rerks-Ngarm, S, Nitayaphan, S, Kaewkungwal, J, Tovanabutra, S, Pitisuttithum, P, Tartaglia, J, Sinangil, F, Kim, J, Michael, NL, Tomaras, GD, Yang, Z, Dai, K, Pancera, M, Nabel, GJ, Mascola, JR, Kwong, PD, Pinter, A, Zolla-Pazner, S, Alam, MS, Haynes, BF
Publicado 2012

Low-glycaemic index diet to improve glycaemic control and cardiovascular disease in type 2 diabetes: design and methods for a randomised, controlled, clinical trial

por Chiavaroli, Laura, Mirrahimi, Arash, Ireland, Christopher, Mitchell, Sandra, Sahye-Pudaruth, Sandhya, Coveney, Judy, Olowoyeye, Omodele, Maraj, Tishan, Patel, Darshna, de Souza, Russell J, Augustin, Livia S A, Bashyam, Balachandran, Blanco Mejia, Sonia, Nishi, Stephanie K, Leiter, Lawrence A, Josse, Robert G, McKeown-Eyssen, Gail, Moody, Alan R, Berger, Alan R, Kendall, Cyril W C, Sievenpiper, John L, Jenkins, David J A
Publicado 2016

Rationale, design, and methods for Canadian alliance for healthy hearts and minds cohort study (CAHHM) – a Pan Canadian cohort study

por Anand, Sonia S., Tu, Jack V., Awadalla, Philip, Black, Sandra, Boileau, Catherine, Busseuil, David, Desai, Dipika, Després, Jean-Pierre, de Souza, Russell J., Dummer, Trevor, Jacquemont, Sébastien, Knoppers, Bartha, Larose, Eric, Lear, Scott A., Marcotte, Francois, Moody, Alan R., Parker, Louise, Poirier, Paul, Robson, Paula J., Smith, Eric E., Spinelli, John J., Tardif, Jean-Claude, Teo, Koon K., Tusevljak, Natasa, Friedrich, Matthias G.
Publicado 2016

Cross-sectional associations between dietary intake and carotid intima media thickness in type 2 diabetes: baseline data from a randomised trial

por Chiavaroli, Laura, Mirrahimi, Arash, Ireland, Christopher, Mitchell, Sandra, Sahye-Pudaruth, Sandhya, Coveney, Judy, Olowoyeye, Omodele, Patel, Darshna, de Souza, Russell J, Augustin, Livia S A, Bashyam, Balachandran, Pichika, Sathish Chandra, Blanco Mejia, Sonia, Nishi, Stephanie K, Leiter, Lawrence A, Josse, Robert G, McKeown-Eyssen, Gail E, Moody, Alan R, Kendall, Cyril W C, Sievenpiper, John L, Jenkins, David J A
Publicado 2017

Casting a wider net: Immunosurveillance by nonclassical MHC molecules

por D’Souza, M. Patricia, Adams, Erin, Altman, John D., Birnbaum, Michael E., Boggiano, Cesar, Casorati, Giulia, Chien, Yueh-hsiu, Conley, Anthony, Eckle, Sidonia Barbara Guiomar, Früh, Klaus, Gondré-Lewis, Timothy, Hassan, Namir, Huang, Huang, Jayashankar, Lakshmi, Kasmar, Anne G., Kunwar, Nina, Lavelle, Judith, Lewinsohn, David M., Moody, Branch, Picker, Louis, Ramachandra, Lakshmi, Shastri, Nilabh, Parham, Peter, McMichael, Andrew J., Yewdell, Jonathan W.
Publicado 2019

Tackling gaps in developing life-changing treatments for dementia

por Mauricio, Rui, Benn, Caroline, Davis, John, Dawson, Gerry, Dawson, Lee A., Evans, Alison, Fox, Nick, Gallacher, John, Hutton, Mike, Isaac, John, Jones, Declan N.C., Jones, Lesley, Lalli, Giovanna, Libri, Vincenzo, Lovestone, Simon, Moody, Catherine, Noble, Wendy, Perry, Hugh, Pickett, James, Reynolds, David, Ritchie, Craig, Rohrer, Jonathan D., Routledge, Carol, Rowe, James, Snyder, Heather, Spires-Jones, Tara, Swartz, Jina, Truyen, Luc, Whiting, Paul
Publicado 2019

Maternal Broadly Neutralizing Antibodies Can Select for Neutralization-Resistant, Infant-Transmitted/Founder HIV Variants

por Martinez, David R., Tu, Joshua J., Kumar, Amit, Mangold, Jesse F., Mangan, Riley J., Goswami, Ria, Giorgi, Elena E., Chen, Juilin, Mengual, Michael, Douglas, Ayooluwa O., Heimsath, Holly, Saunders, Kevin O., Nicely, Nathan I., Eudailey, Joshua, Hernandez, Giovanna, Morgan-Asiedu, Papa Kwadwo, Wiehe, Kevin, Haynes, Barton F., Moody, M. Anthony, LaBranche, Celia, Montefiori, David C., Gao, Feng, Permar, Sallie R.
Publicado 2020

Implementation of a Pooled Surveillance Testing Program for Asymptomatic SARS-CoV-2 Infections on a College Campus — Duke University, Durham, North Carolina, August 2–October 11, 2...

por Denny, Thomas N., Andrews, Laura, Bonsignori, Mattia, Cavanaugh, Kyle, Datto, Michael B., Deckard, Anastasia, DeMarco, C. Todd, DeNaeyer, Nicole, Epling, Carol A., Gurley, Thaddeus, Haase, Steven B., Hallberg, Chloe, Harer, John, Kneifel, Charles L., Lee, Mark J., Louzao, Raul, Moody, M. Anthony, Moore, Zack, Polage, Christopher R., Puglin, Jamie, Spotts, P. Hunter, Vaughn, John A., Wolfe, Cameron R.
Publicado 2020

Functional Homology for Antibody-Dependent Phagocytosis Across Humans and Rhesus Macaques

por Pollara, Justin, Tay, Matthew Zirui, Edwards, R. Whitney, Goodman, Derrick, Crowley, Andrew R., Edwards, Robert J., Easterhoff, David, Conley, Haleigh E., Hoxie, Taylor, Gurley, Thaddeus, Jones, Caroline, Machiele, Emily, Tuyishime, Marina, Donahue, Elizabeth, Jha, Shalini, Spreng, Rachel L., Hope, Thomas J., Wiehe, Kevin, He, Max M., Moody, M. Anthony, Saunders, Kevin O., Ackerman, Margaret E., Ferrari, Guido, Tomaras, Georgia D.
Publicado 2021

Ecological Analysis of the Decline in Incidence Rates of COVID-19 Among Nursing Home Residents Associated with Vaccination, United States, December 2020-January 2021

por Benin, Andrea L., Soe, Minn M., Edwards, Jonathan R., Bagchi, Suparna, Link-Gelles, Ruth, Schrag, Stephanie J., Herzer, Kurt, Verani, Jennifer R., Budnitz, Daniel, Nanduri, Srinivas, Jernigan, John, Edens, Chris, Gharpure, Radhika, Patel, Anita, Wu, Hsiu, Golshir, Beth C., Jaffe, Aaron, Li, Qunna, Srinivasan, Arjun, Shulman, Evan, Ling, Shari M., Moody-Williams, Jean, Fleisher, Lee A., Pollock, Daniel A., Bell, Jeneita
Publicado 2021

Different adjuvanted pediatric HIV envelope vaccines induced distinct plasma antibody responses despite similar B cell receptor repertoires in infant rhesus macaques

por Berendam, Stella J., Morgan-Asiedu, Papa K., Mangan, Riley J., Li, Shuk Hang, Heimsath, Holly, Luo, Kan, Curtis, Alan D., Eudailey, Joshua A., Fox, Christopher B., Tomai, Mark A., Phillips, Bonnie, Itell, Hannah L., Kunz, Erika, Hudgens, Michael, Cronin, Kenneth, Wiehe, Kevin, Alam, S. Munir, Van Rompay, Koen K. A., De Paris, Kristina, Permar, Sallie R., Moody, M. Anthony, Fouda, Genevieve G.
Publicado 2021

HIV-1-Specific IgA Monoclonal Antibodies from an HIV-1 Vaccinee Mediate Galactosylceramide Blocking and Phagocytosis

por Wills, Saintedym, Hwang, Kwan-Ki, Liu, Pinghuang, Dennison, S. Moses, Tay, Matthew Zirui, Shen, Xiaoying, Pollara, Justin, Lucas, Judith T., Parks, Robert, Rerks-Ngarm, Supachai, Pitisuttithum, Punnee, Nitayapan, Sorachai, Kaewkungwal, Jaranit, Thomas, Rasmi, Kim, Jerome H., Michael, Nelson L., Robb, Merlin L., McRaven, Mike, Montefiori, David C., Hope, Thomas J., Liao, Hua-Xin, Moody, M. Anthony, Ferrari, Guido, Haynes, Barton F., Alam, S. Munir, Bonsignori, Mattia, Tomaras, Georgia D.
Publicado 2018