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20701por Wu, Yanze, Jiang, Ting, Hua, Jinghai, Xiong, Zhiping, Chen, Hui, Li, Lei, Peng, Jingtian, Xiong, Wenjun“…Furthermore, DEGs were performed via gene ontology (GO) functional and kyoto encyclopedia of genes and genome (KEGG) pathway analyses. …”
Publicado 2022
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20702por Yang, Kun, Wang, Fengyan, Li, Ke, Peng, Guoxuan, Yang, Hua, Xu, Hong, Xiang, Yang, Sun, Hong“…StarBase and Cytoscape were used to construct a competing endogenous RNA (ceRNA) network based on m6A-related prognostic lncRNA signature. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses were performed to analyze the function of genes involved in the ceRNA network. …”
Publicado 2022
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20703“…The differentially expressed genes (DEGs) between the two types of samples were identified with the Linear Models for Microarray Analysis package in R. Gene Ontology (GO) functional term and Kyoto Encyclopedia of Genes and Genomes (KEGG) signaling pathway enrichment analyses were also performed. …”
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20704por Gao, Yahui, Feng, Jing, Wu, Jiafa, Wang, Kun, Wu, Shuang, Liu, Hongcun, Jiang, Mingguo“…Comparative transcriptome analysis was conducted between GX14001 VOCs-treated tobacco and the control; it was found that 1286 genes were upregulated and 1088 genes were downregulated. Gene ontology (GO) analysis showed that upregulated genes were involved in three biological processes: polysaccharide metabolic, polysaccharide catabolic and carbohydrate metabolic. …”
Publicado 2022
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20705por Li, Shaochuan, Yang, Yuning, Wang, Xin, Li, Jun, Yu, Jun, Li, Xiangtao, Wong, Ka-Chun“…The results reflect that DeepCSD can achieve superior performance over other algorithms. In addition, gene ontology enrichment and pathology analysis are conducted to reveal novel insights into the cancer subtype identification and characterization mechanisms. …”
Publicado 2022
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20706por Winkler, Ethan, Wu, David, Gil, Eugene, McCoy, David, Narsinh, Kazim, Sun, Zhengda, Mueller, Kerstin, Ross, Jayden, Kim, Helen, Weinsheimer, Shantel, Berger, Mitchel, Nowakowski, Tomasz, Lim, Daniel, Abla, Adib, Cooke, Daniel“…Differential gene expression, ontology, and correlative analyses were performed. …”
Publicado 2022
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20707por Han, Miao, Li, Heng, Ke, Dan, Tian, Li-Ming, Hong, Yi, Zhang, Chong, Tian, Dai-Zhi, Chen, Long, Zhan, Li-Rui, Zong, Shi-Qin“…Finally, we performed Gene Ontology (GO) enrichment analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis by Metascape database. …”
Publicado 2022
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20708por Yao, Ninghua, Zuo, Ling, Yan, Xiaodi, Qian, Jing, Sun, Jie, Xu, Huawei, Zheng, Feifei, Efird, Jimmy T., Kawagoe, Izumi, Wang, Yan, Ni, Sujie“…The biological functions of the characterized lncRNAs were analyzed by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG). …”
Publicado 2022
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20709por Liu, Chuan, Wang, Ting, Yang, Jiahui, Zhang, Jixiang, Wei, Shuchun, Guo, Yingyun, Yu, Rong, Tan, Zongbiao, Wang, Shuo, Dong, Weiguo“…The Kyoto Encyclopedia of Genes and Genomes (KEGG) Pathway and Gene Ontology (GO) annotation and String website were used for enrichment analysis and protein–protein interaction (PPI) analysis of DEGs, respectively, and Cytoscape software was used to construct PPI network and screen function modules and hub genes. …”
Publicado 2022
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20710por Wang, Ting, Fan, Liming, Feng, Shuai, Ding, Xinli, An, Xinxin, Chen, Jiahuan, Wang, Minjuan, Zhai, Xifeng, Li, Yang“…Then, DAVID bioinformatics resources and R 3.6.3 project were used to carry out Gene Ontology enrichment analysis and Kyoto Encyclopedia of Genes and Genomes pathway analysis. …”
Publicado 2022
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20711“…The expression profiles of lncRNAs, mRNAs circRNA and miRNAs were obtained. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were then performed. …”
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20712“…The average mutation rate in the genome of the EMS treatment group (0.0137 ± 0.0013%) was about 9 times that of the control group (0.0015 ± 0.0002%). GO (Gene Ontology) annotation and KEGG (Kyoto Encyclopedia of Genes and Genomes) enrichment analyses revealed that mutations induced by EMS occurred evenly in most biological processes, cellular components and functions, as well in most pathways. …”
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20713por Dong, Yang, Zheng, Yanfei, Zhu, Linghui, Li, Tianxing, Guan, Yuanyuan, Zhao, Shipeng, Wang, Qi, Wang, Ji, Li, Lingru“…Combining the hub genes and the results of Gene Ontology (GO) functional and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis of H-O-O targets, PI3K-AKT and MAPK signaling pathways were identified as the key pathways. …”
Publicado 2022
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20714por Zheng, Jiafeng, Dong, Hanquan, Zhang, Tongqiang, Ning, Jing, Xu, Yongsheng, Cai, Chunquan“…EMT- and immune-related genes were identified by gene set variation analysis (GSVA) and the Estimation of STromal and Immune cells in MAlignant Tumors using Expression data (ESTIMATE) algorithm. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were performed to investigate the functions of these EMT- and immune-related genes. …”
Publicado 2022
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20715“…DCBLD2 and RAPGEF5 were validated as two core mRNAs in the DElncRNA, DEcircRNA, and DEmiRNA networks. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses revealed the biological functions and potential mechanisms of TCONS-00008997, XR-925056.2, circRNA-07908, hsa-miR-100-3p, hsa-miR-1257, hsa-miR-3182, NAV3, ADAM20, and STARD4, which were altered after GA-Me treatment. …”
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20716“…Moreover, molecular docking techniques were employed in this research. Gene Ontology (GO) and the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment studies of overlapping targets were carried out using the R software (version: 4.0.5; Lucent Technologies Co., Ltd., China). …”
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20717“…The patients in the above-mentioned cohorts were divided into low-risk group and high-risk group according to the median prognostic risk score, and the diagnostic performance of the model was assessed by receiver operating characteristic curve analyses. The gene ontology and Kyoto encyclopedia of genes and genomes pathway enrichment analyses were performed between the high-risk and low-risk patients. …”
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20718por Diaz, Jenny R., Martá-Ariza, Mitchell, Khodadadi-Jamayran, Alireza, Heguy, Adriana, Tsirigos, Aristotelis, Pankiewicz, Joanna E., Sullivan, Patrick M., Sadowski, Martin J.“…KEGG enrichment and gene ontology analyses show apoE2 and apoE3 commonly activate expression of genes involved in neurite branching, and synaptic signaling. …”
Publicado 2022
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20719por Yin, Zhaozheng, Zhou, Wei, Mao, Haiguang, Dong, Xinyang, Huang, Xuan, Zhang, Haiyang, Liu, Honghua“…Most genes are involved in cell proliferation and differentiation, lipid metabolism and energy metabolism according to Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis of DEGs. …”
Publicado 2022
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20720por Shi, Yanlong, Ma, Xinyu, Wang, Menglu, Lan, Sheng, Jian, Haokun, Wang, Yue, Wei, Qian, Zhong, Fei“…Additionally, the potential functions of ANLN were explored using Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analyses. …”
Publicado 2022
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